Colias croceus (clouded yellow): 123705786
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Entry
123705786 CDS
T08651
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123705786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123705786
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123705786
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123705786
Coactivators
SAGA/TFTC/STAGA complex
123705786
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123705786
STAGA complex
123705786
TFTC complex
123705786
SAGA complex
123705786
SLIK complex
123705786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_RFWD3
VPS8_N
Beta-prop_DCAF4
Beta-prop_HPS5
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123705786
NCBI-ProteinID:
XP_045510756
LinkDB
All DBs
Position
3:complement(6402044..6417373)
Genome browser
AA seq
651 aa
AA seq
DB search
MGDKSTPLLAVLHLLKKYNLKGTEEILRKEANLGDTQFDNLDLPEVELASILTAHHTESD
PFTYELAYDGLKKYIENSLDIYKYELSTLLYPVFVHMYLVLILYDHNEHAEKFLERFGPE
QEDYYQDDLKRLSIVKTKEQIKGNEIAEIYSSNKFEVQLSRDASSQLKRFLHEQKSSPVI
INIINNHIQIDVHDGPGRTQAQVRATAGGILGEATRNENRAKVYYGLLKEPYIEVLPTPV
EDEEEVEEAADKPKKKKAKKDNIFMKKPKLDPNAPPNDRIPLPELKETDKIEKGKALREA
SKRVQLGPETMPSICFYTLLNSGNNALCADICDDSTLLSVGFNNSTIKVWTLTTVRLRGM
KSVDKLQDIDREAGDVLVRMMEEKDRDTCRTLYGHSGPVYKVGFDPFKTMLLSCSEDSTV
RLWSLQCWTCLVVYRGHVWPVWDVKWSPHGHYFVSSGHDHTVRMWATDHHQPLRIFAGHL
SDVDCVQFHPNSNYIATGSSDRTVRLWDCLTGQQVRIMTGHKRTIFTLSFSVCGRWIASG
GGGGEIIVWDISTGSPTAALPLFHTAPITTLAFSRDGAILSSGSLDCTIKLWDFAAITDE
STNDDNTGNNSAPKEEKFLLRSFATKNSPLKNLHFTRRNLLLAVGSYEGSS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaatctacaccactacttgctgtgctccacttattgaaaaaatacaatcta
aagggcactgaagaaattctaagaaaggaagccaacttaggtgatactcaatttgacaat
ttagacttgccagaggttgaactagcaagtatcctcacagctcatcataccgaaagtgat
ccatttacttacgaacttgcatacgatggtctcaagaaatatattgaaaactccttagat
atttataagtatgaattatcaacacttctctatccagtttttgttcacatgtatttagtt
cttatattatatgaccacaatgaacatgctgaaaagtttttggaaagatttggtccggaa
caagaggattattatcaggatgatttgaaacgtctgtctatagtgaaaacaaaagaacag
ataaaagggaatgaaattgctgagatatacagttcaaataaatttgaggtgcaactatca
agggatgcatcttcccaattaaagcgatttctacatgaacagaaaagttcaccagttatt
attaatattataaataatcacatacaaattgatgtacacgatggacctgggagaactcaa
gctcaagtaagagcaactgctggaggaattcttggtgaagccacaagaaatgagaaccgg
gccaaagtatactatggcctactcaaagaaccctatatagaagttcttccaacaccagta
gaagatgaagaggaagtagaagaagcagctgataaacccaaaaagaaaaaagctaaaaag
gataatatttttatgaaaaagccaaaattggaccccaatgctcctccgaatgacagaatt
cctttaccagaattgaaagaaactgacaagatagaaaaagggaaagctctaagagaagca
tccaagcgtgttcaactgggaccagagacaatgccttctatatgtttctatacactgctc
aacagcggtaataatgcattgtgcgctgacatttgtgacgattccacattactctcagtg
ggctttaacaattccactattaaggtatggacgcttacaactgtaagactacggggaatg
aaatctgttgacaaattgcaagatattgatagagaagcaggtgatgtccttgtgcgaatg
atggaggaaaaagatagagatacatgtcgtacactatatggtcattctggacctgtctac
aaagtgggatttgatccatttaaaacaatgctcctgtcttgttcggaagattccacagtc
agattatggtcattgcaatgctggacatgtctagtggtatatagaggtcatgtgtggcca
gtttgggatgtgaaatggtctccacatggtcactactttgtgtccagtggccatgaccac
acagtacgtatgtgggccactgaccatcatcaaccgttgaggatctttgctggacatttg
tctgatgttgattgcgttcaattccatcccaactcgaactatattgcaacggggtcgagc
gaccgaactgtgcgtctttgggactgtctgactggccaacaagttcgcattatgactggt
cacaaacgcacaatatttacgctgtcattctcagtatgcgggcgctggatcgcgtccggt
ggtggaggcggtgagatcatcgtttgggacatctcaaccggctcccctacagccgctctt
ccgcttttccacactgcgcccataaccacgttagctttcagccgtgatggcgcaatatta
tcgtcaggttctttggattgtactatcaaattgtgggactttgcggctattacagatgaa
agtacaaatgatgataacaccggaaataactcagcaccaaaagaagaaaaatttctattg
cgctcctttgcaactaaaaactcaccacttaaaaatttacattttactaggcgcaatctt
ttattggctgttggttcatatgaaggaagttcttaa
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