Chlamydia crocodili: H9Q19_01080
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Entry
H9Q19_01080 CDS
T08674
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccrd
Chlamydia crocodili
Pathway
ccrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q19_01080 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrd03019
]
H9Q19_01080 (pnp)
03016 Transfer RNA biogenesis [BR:
ccrd03016
]
H9Q19_01080 (pnp)
Enzymes [BR:
ccrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H9Q19_01080 (pnp)
Messenger RNA biogenesis [BR:
ccrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9Q19_01080 (pnp)
Transfer RNA biogenesis [BR:
ccrd03016
]
Prokaryotic type
tRNA degradation factors
H9Q19_01080 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
QVE49290
LinkDB
All DBs
Position
233282..235366
Genome browser
AA seq
694 aa
AA seq
DB search
MTFETISVTLEEGKTLVFETGKIARQANGAVLARMQETWIFSSVCAANLEEPVDFLPLRV
DYQEKFSSIGKTLGGFIKREGRPTEREILTSRLIDRSMRPSLPNRLMQDVQVLSYVWSYD
GVTLPDPIAICGVSAALAISDIPQISIVAGVRVGFVNNSWIVNPTKAEMDVSRMELILAG
TENAILMIEGHCDFFTEEQVIEAIEFGHKHIATICRAIKDWQKKIGKEKNTDVIVPLPEQ
VQSSVNAFVESKFSDLLKIKEKKAFEAASKQLENEIIEKFLEENEIFTALNIKTAFKRAK
SDYMRTLIREQSVRSDGRSVTTIRPISIDTSFLPRTHGSCLFTRGETQTMAVCTLGSEAM
AQRYEDLNGEGLAKFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHTLPDPAKF
PYTIRIESNITESNGSSSMASVCGGCLALMDAGVPIKTPIAGIAMGLILDNDHVTILSDI
SGLEDHLGDMDFKVAGNTEGITAFQMDIKVEGITPAIMQAALAQAKAGRQHILDTMKESL
AAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDINDSGLVSISASS
PQAIEKAKSIIEGLVGEVEVGKIYEGRVTSIVPFGAFVEILPGKEGLCHISEFSKQRIEN
VGDFVKQGDILAVKLLSINEKGQYKLSHKATLSE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaactatttccgttacccttgaagaaggcaaaacattagtatttgaaacg
gggaaaattgctcgtcaagctaacggagctgttcttgctcgcatgcaagaaacttggatc
ttttcatctgtttgcgcggccaatctcgaagaaccagtagatttccttcctttaagagtc
gattatcaagaaaaattttcttctataggaaaaactttaggcgggttcattaaaagagaa
ggccgtccaactgaaagagaaattttaacttctcgtctaatagatcgttctatgcgtcct
tctttgccaaaccggttaatgcaggatgttcaagttttatcttatgtatggtcgtatgat
ggggtgactctccccgaccctatagctatttgtggtgtttctgcagcattagctatttct
gacattcctcaaattagtattgtagctggtgttcgtgttggctttgtcaacaacagttgg
atagtgaatccgacaaaagctgaaatggatgtttctagaatggaactcattttagcagga
actgaaaatgctattttaatgatagagggtcattgtgatttctttacggaagaacaggtt
attgaagctattgaatttggtcataaacatatagcaacaatctgcagagcaatcaaagat
tggcaaaagaagataggtaaagaaaagaacactgatgttattgttcctcttccagaacaa
gtacaatcttctgtaaatgcatttgttgaaagtaaattctctgatcttttgaaaatcaaa
gagaagaaggcttttgaggctgcttcaaaacagttagaaaatgaaatcatagagaaattc
ttagaagaaaatgaaatcttcacagcactgaatattaaaacagcctttaaacgagctaaa
tcggattacatgcgtactttaatacgtgaacaaagtgttcgttctgatggacgttcagta
acaacaatccgccctatttccattgacacatccttcctaccaagaactcatggaagttgt
ttattcactcgtggagaaacacaaaccatggccgtttgtactttaggtagcgaagccatg
gctcaacgctatgaagacttgaatggagaaggattagctaaattttatttacaatatttc
ttccctcctttctctgttggagaagtaggaagaataggctctccaggaagaagagaaatt
ggccatggcaagcttgctgaaaaagctttaagccatactttacctgatcccgctaagttt
ccttatactatccgtatagaatccaatattactgaatctaacggttcttcatctatggct
tctgtttgtggaggctgtttagctttaatggatgctggagttcctattaaaacccctata
gcgggtattgctatgggattaatcttagataatgatcatgtaactattctctcagatatt
tctggattagaagatcatttaggagatatggattttaaggttgctgggaacactgaagga
atcacagcattccaaatggatatcaaggtagagggtattactcctgcaattatgcaagca
gctttagctcaagctaaagctggtcgtcaacatatccttgacaccatgaaagaatccctt
gctgctcccaaaacagatttatcgcaatatgctcctcgtattgaaacgatgcagattaag
ccaaacaagatcgctactgtcattggacctggaggcaaacagattcgtcaaattattgaa
gaagctggagttcaaatcgatattaatgactcaggtcttgtcagtatctcagcgtcttct
ccacaagcgatagaaaaagctaagtctattattgaaggtttagttggcgaagtggaagtt
ggtaagatctatgaaggtcgtgtgacatccattgttccttttggagcttttgtggaaatt
ctcccaggtaaggaaggtctttgccatatttctgagttctctaaacaacgtatagaaaac
gttggtgatttcgttaagcaaggagacattctagctgttaagctgttaagcattaacgaa
aaaggccaatacaaactcagtcataaagctactcttagtgagtag
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