Chlamydia crocodili: H9Q19_03350
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Entry
H9Q19_03350 CDS
T08674
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccrd
Chlamydia crocodili
Pathway
ccrd03410
Base excision repair
ccrd03430
Mismatch repair
ccrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9Q19_03350 (recJ)
03430 Mismatch repair
H9Q19_03350 (recJ)
03440 Homologous recombination
H9Q19_03350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccrd03400
]
H9Q19_03350 (recJ)
DNA repair and recombination proteins [BR:
ccrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H9Q19_03350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H9Q19_03350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9Q19_03350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
PhoU
Motif
Other DBs
NCBI-ProteinID:
QVE48731
LinkDB
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Position
738840..740612
Genome browser
AA seq
590 aa
AA seq
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MASKDNSSVPSPNWVYPKQDPALLSTVIKELHLHPIAAQIFISRGFQTVNEVRDFLYVHL
DNLHDPELLLDMSKAIERLLLAKERNEHVMIYGDSDVDGMTGVALLVEFLRSIDMKVSYC
FLGALLKHHGEPSSLIARMKEENVSLLITVDCGITAGKEVSDINKQGIDVIITDHHMPTG
KIPHCIATLNPKLRDRAYPNKELTGVGVAFKLARGVLNALKKKNPKLKIDIKHLLDLVTL
GTVTDVGTLLGENRTMVRHGIKEIANSSRLGLHKLCLLAGVKPSEVTSTDIVLKIAPKLN
SLGRLSDASKGVELLLTEDPEAADEIIQYLDKINRERQKIEADVFHDVQKILKNKPEIVK
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGIGKGSLRTIGSFPLLGILQKC
ASLFVSYGGHDFAAGIIINEDQIEVFRKKFIHLVNSSLKKDKAVLTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPVFYTVVHQVRYPKLLPGNHLKLYLSRGERNLEGIAFGLGDR
IDALKANWNKPLELAYTPRLSQSSNGGVIHLLVRDFRILPLNYKDTNIEF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagataattcttctgtacccagtcctaactgggtataccctaagcaggat
cctgcattgctttctacagttataaaggaattgcatcttcatccgatagccgcacagatc
tttatttctcgaggatttcaaactgtgaatgaagtccgggattttctttatgtacatcta
gataatcttcatgatccagaactcttgcttgatatgtccaaggctatagagcgtttgctt
cttgctaaagaacgcaatgagcatgtcatgatttatggtgatagtgatgttgatggaatg
acaggggttgctcttctcgtagagtttttaagatctatagatatgaaagtcagctactgc
tttttgggagctctactaaaacaccacggagaaccctcctcactgattgctagaatgaaa
gaggagaatgtctcattactgattacagtagattgtgggatcaccgcgggaaaagaagtc
agcgatatcaataagcaggggattgatgtgattataacagatcatcatatgcccacgggt
aaaattcctcattgcatagcaacattaaaccctaaattaagagatcgtgcctatcccaat
aaagaattaacaggtgtaggcgtcgcgtttaagctcgcgcgcggtgtccttaatgcatta
aagaaaaaaaacccgaaattaaaaatagatattaaacatctgttggatttagtgacttta
gggacagtgactgatgtggggactcttttaggagaaaatcgtactatggtacgccatggc
attaaagagatagctaatagttcgcgattaggtcttcataaattatgtcttcttgctgga
gtaaagccttcagaagttacctcaactgatattgttttgaaaatagctccaaaattgaac
agcttgggtaggctttctgatgcttccaagggtgttgaacttttacttaccgaagatcca
gaagccgccgatgagataatccagtaccttgataagataaatagagaacggcagaagata
gaagctgatgttttccatgatgtacaaaaaatcttaaaaaataaacccgagatagttaag
caggctgctattgtattatcctctcaagattggcactcaagggttattccgatcatttct
gcacgtctagctaaagcttataataaacctgtggctattatttctaatcaaggaggtata
gggaaaggatcattgaggactataggttcttttcctcttcttggtatattacagaaatgt
gcgtctttgtttgtatcttatggagggcatgattttgctgcggggatcatcattaatgaa
gatcaaatagaagtttttagaaagaagttcattcatcttgtgaactcatcgttaaaaaag
gataaggcggttcttactttgcctctcgatgctcgagctgattttgacgagatagaccat
gatttattatcttctatagatctttttgagccttttgggaaaggtaaccccgtcccagta
ttttatactgtagtgcatcaggtgcgttatccaaagttattgccggggaaccatctcaag
ctttatctcagtcgtggagaaaggaatttagaaggtattgctttcggattgggggatagg
atagatgctctcaaagctaattggaataagcctttagaacttgcttatacgccacgtttg
tctcaatcttctaacggaggagttattcatttactagttcgagatttccgcattcttcca
ttaaattataaagacaccaacatcgagttttaa
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