Chlamydia crocodili: H9Q19_03915
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Entry
H9Q19_03915 CDS
T08674
Name
(GenBank) Pmp family polymorphic membrane protein autotransporter adhesin
Organism
ccrd
Chlamydia crocodili
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chlam_PMP
ChlamPMP_M
Motif
Other DBs
NCBI-ProteinID:
QVE48837
LinkDB
All DBs
Position
complement(892389..896501)
Genome browser
AA seq
1370 aa
AA seq
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MKSSVPWLLISSAITLPLSSIVAAEEAVVEVSEPKVSQSQNGNVNLGPSDNYPGTGGNGS
GFTYKETSTPTGTIYTLTGDVSISNVTATQAPASSNQPEVQSQPKVESIEKNGAESENGK
SNSESDKENKNASSEGDSSTSSGERSSTEPKIEESSSAESPQPSTTVVSTENNSSSSSES
TEVTSNSGTETVTTSRVSSRSLRADIVASDASSSSSSDSSNPNGSQVSQTPTKSCFSNTA
GPLTFVGASHSLIFDTVTIEAQGAAINNSAGSALTLSGFSNLSFTKSTNQDQTKADSAIY
VGPKKSEVPANGGVGVVPGASSVPGNSVSNSASEPNAAASLWMISSDTSASEKGSSGENS
VASPKAAEEAASTPAIILKENVNITFSGNSSKKAGGAINVDGGSATIENNTGICTFSNNN
AKEQGGAVSVTGNFDIAGNKTVVFSGNKAEVVPSPTESPEGKAAAVVSNQAQTPATGTGG
AIHCLAGDASVPAAKAPEKVVAAATEGVLPSIRAVSLSADSPAPKVEKQADAAAAADPCV
TISGNTTVTFDNNSSTVSGGAIHTKKLVLSSGGDITFSNNSSGKGGAIFITDGGDIRITA
ATGSITFQGNTVTTADPITIPAKPQAGAADSAVARPVSSNGQADAPQANAVQPEDGKIVA
AFATFANAQVDAKAKADQNQPQKPSHNAIHLGSGATISQLRAGTGQTIFFYDPITTTKPA
AASAGSSGSSGPAGPTGAYGIRAAAVTAAGAAQAATPKTPLKINAPDAQEPALKEAPVSG
ETKQATYNGTIVFSGEKLSAEDAKNPLNAMSVINTDVSLEAGTLVLRSGAGLLVDSFVQK
DGSLIIMDGGTSIITNVPAVSNPSSKAASVPTVPNNVVPVVNASSKSDLKIISDLVASSL
INFKPRGPSASAPAVSNSQVQNPDGSITITNLAVNLDSLSGGKVITLAATGTGNVTLTGD
LKFQDSSQNFYDNPMLNKNFSANILDISTTTGGKVNTEGFNMIPQGSTSSNVGYQGKWEV
KEVKDASGKVSFELQWISTGYTPTPNRRATLVPNSLWCSAIDIRAIQQLVEVSTQGEDFH
KGIWISGISNFFHRDSMKVQKGFRHISSGYVVGASTQPITDRVIDIAFCQMFGKSKDYHL
AKTRSHIYAASIHTKREKLINHYKLSNKKGSILNKLPEQMPVIFDAQLSYSLSHNSMTTK
HTPDPSSKGKWNNHCVAGELGSYLPIVIDNPFIEEFSPFMKLHVVFVQQEDFKETKGGDA
NRNFQSAHFVNISLPIGMKFEKTNKYNIYNISLIYQPDIYRDAPKSKVFLPSTDTGWSTG
ATNLARQALIIDGCNHHHLTDSFEVFCHGAFELRESSRNYNLDLGGRYKF
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttccgttccttggttgttaatctcatcagcaattacacttccattatcctct
attgttgctgccgaagaagcagttgtagaagtttctgaaccaaaagtttctcaatctcaa
aatggaaacgtaaatttaggtcctagcgataattatccaggaacaggaggtaatggatct
ggatttacttataaggaaacctcaactcccacaggaactatctatacactgacgggtgac
gtatcgatatctaatgtaaccgctacccaagcaccggcttccagcaatcaacctgaagtt
cagtctcagcctaaagttgaatctatagagaaaaatggtgctgaatccgaaaatggaaaa
tctaatagcgaaagtgataaggaaaataagaacgcaagttcagaaggagattcttcaacc
tcttcaggagagcgttcaagtacagaaccaaaaatagaagaatcatccagcgcagaatct
ccacaaccaagtactacagttgttagcactgaaaacaattctagctctagttctgaatcc
actgaagttacatcaaattctggaactgaaacagtaacaacatctcgcgtttcatctaga
tcactaagagctgatattgtcgcctcagacgcaagcagttcatctagctccgattcttca
aatcccaatggatctcaagtctctcagaccccgactaaaagttgtttctcaaatactgca
ggccctcttacttttgttggagctagtcattccctcatttttgatactgtaaccatagaa
gctcaaggagctgctattaataatagtgctggatcagctttaacattgtcaggatttagt
aacttatccttcactaaatctacaaaccaggatcaaacaaaagcagacagtgctatctat
gtaggacctaaaaaatctgaggttcctgcaaacggaggtgttggagtggttcctggagct
agtagtgttcctggaaattctgtgagtaacagcgcatcagaaccaaatgctgcagcaagc
ctctggatgatatcttcggataccagtgcatctgagaaaggtagttctggtgaaaacagt
gttgccagtccaaaagctgctgaagaagctgcatctactccagccattatccttaaagaa
aacgtcaatatcacattttctggtaactcctctaaaaaagctggtggagctattaatgtt
gacggtggttcagcaacaatagaaaataatacgggaatatgtaccttctcaaataacaat
gctaaagaacaaggtggtgctgtatctgttactggaaatttcgatatcgctggaaacaaa
acagtcgtcttttccggaaataaagccgaagttgttccgtcacctacggaatcacctgaa
ggaaaagctgcagcagttgtttcaaatcaagctcaaacaccagcgacaggtaccggtgga
gccattcattgtttagctggtgatgcctctgttcccgctgctaaagctccagaaaaagtt
gttgccgctgccacagaaggagtccttccttctataagagctgtatcgttatcagcagat
agtccggctcctaaagttgagaaacaagcggatgccgctgcagccgctgatccatgtgta
accatctcaggaaatactactgttacatttgataataattcctctactgttagtggtgga
gctattcatactaagaaattagttctatcttctggtggcgatatcaccttctctaataac
tcttccggaaaaggtggagctatcttcattactgatggtggagatatccgcattactgct
gctacaggatcaattactttccaaggcaatacagttacaacagctgacccaatcactatt
cctgccaaaccacaagcaggagccgcagattctgcagtcgctagaccagtctctagtaat
ggtcaagctgatgctcctcaggcaaatgctgttcaacctgaggatggaaaaattgtagct
gcgtttgcaacttttgctaatgctcaagtagatgctaaagctaaggcagatcaaaatcaa
cctcaaaaaccctcccacaatgctattcatttaggtagtggagcgacaatttcacaatta
cgtgctggaactgggcaaacgattttcttctatgatcctattacaactaccaaaccagct
gctgctagcgcaggatcgtctggatcatcaggacctgcaggcccgactggagcttatgga
ataagagctgccgcagttactgctgctggagcagctcaagctgcaacacctaaaactcct
ctaaaaatcaatgctcctgatgcacaggaaccagcattaaaagaagctcctgtttctgga
gaaacaaaacaagccacttacaatggtactattgtcttctctggagaaaaactctcagcc
gaagatgctaaaaatccattgaatgcaatgagcgttattaatactgatgtatctcttgaa
gcaggaactcttgttttaagaagtggagctggtcttcttgtagactcttttgtacagaaa
gatggttctttgatcattatggatggtggaacatcaattataacaaatgttccagctgtt
tcaaatcctagttctaaggctgcttcagtaccaacagttcctaataatgtagttcctgtt
gtaaatgcgtcctctaaatcagaccttaaaattatatctgatttagtagcctcctcttta
atcaactttaaaccaagaggtccttctgcatctgcgcctgctgtatctaactcacaagta
caaaatccagacgggtcaattacaattactaatcttgctgttaatttagattctctgagt
ggaggaaaagttatcactcttgccgctactggaacaggaaatgttactttgacaggagat
ttgaaattccaagatagcagtcagaatttctacgataatccgatgttaaacaaaaacttc
tcagcaaatatcttagatatttcaacaactactggaggcaaagtaaatactgaaggtttc
aatatgatccctcaaggttctacgagctctaatgttggttatcaaggaaagtgggaagtt
aaggaagttaaagatgctagtggtaaagtctcctttgaacttcaatggatatccacaggt
tacacacccactccaaatcgccgtgcaactttagtgcctaacagcttatggtgttctgct
attgatattcgtgctattcaacaacttgttgaagttagcacccaaggcgaagacttccat
aagggtatatggatttcaggaatctctaacttcttccatagagactccatgaaagtacag
aaagggtttcgtcatattagttcgggatatgttgtgggcgcaagcacacaaccgatcact
gatagggttattgatattgctttctgtcagatgtttggtaaatctaaagattaccatctt
gcaaaaactagatcgcatatctatgcagcatctatccatacgaaacgtgaaaagctaatc
aatcactacaagctctcgaataagaaaggttctatccttaacaaactccctgagcaaatg
cctgtaatctttgatgctcaacttagctacagtttaagtcataactctatgactacaaaa
cacactcccgatccttcatcaaaaggtaaatggaataaccactgcgtagctggagaacta
ggaagctatcttcctatagttattgataatccatttattgaagagttctctccattcatg
aaacttcatgttgtcttcgtacaacaagaagacttcaaagaaactaaaggaggagatgca
aataggaatttccaaagtgctcactttgtaaatatttccctccctattggtatgaagttt
gagaaaacaaacaaatataacatttataatatcagccttatctatcagcctgatatctat
cgtgatgctccaaaatctaaagtattcctaccctctacagatactgggtggtctacagga
gcaacaaacttagctagacaagctttaataattgatggctgtaatcatcaccatttaaca
gatagtttcgaggtcttctgtcatggagctttcgaactacgcgaatcttctagaaattac
aaccttgacctaggaggtaggtacaaattctaa
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