Cariama cristata (Red-legged seriema): 104154527
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Entry
104154527 CDS
T08341
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104154527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccri03009
]
104154527
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
Pre-60S particles
RNases
104154527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
NADH_B2
Motif
Other DBs
NCBI-GeneID:
104154527
NCBI-ProteinID:
XP_009698890
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
LTSTSSECIPKSSDLQCDPIIRKYGGKKQGLTSYTLTLEEQKKNDYPIKGSPECKGYIYT
ECDQQRTDSSPLFGLDCEMCLTAKGSEVTRVSLVDAQGQCLLNELVKPESTVVNYRTRFS
GITKKMLLPVKTTLPDIQTRLKKMLPHDAVLVGHSLNADLQALEMIHPSVIDTSLLFARN
EGRRFKLKFLAKAVLGKEIQCEQKLGHDPTEDARAALELAQFFIEQGPAKVAELNLEMLL
TAEKLAEVSQSKAALQPQGCRVQKQLNEPPHLSKPCFLDYLRVTGQNPLLLGRQELDSSG
LCQSNLSASNKQILQRALEDVPLSTFSVIQFSLGPEYIASHLLAGLCEKVRSKLTDMLTI
YAGPFEESFCLKSVKKEFGRCGPIRSLTVVTETYQPYVCIQYEVLEAAQLAVESLNGAEV
AGCRIKVQRPVTAAMLDCDVLIKELELDVENEGVIYVAGLKKSITELDLQEEFSQLKDLE
TLFLPKDLQSGRHRNCCFLKFQKSQSAVDALEVINGWTMKGGKLRSRNALASGHLWRWIW
QMNHSNGKQGGNILYEKMEQLSDSELKKKVKKLDHHIKKLYRSLQNNTLCIVLFPGVNST
HGSQSGLGLMEIKDDGGRSAC
NT seq
1868 nt
NT seq
+upstream
nt +downstream
nt
ggttgacttccactagcagtgaatgtattcctaaaagctcagacttgcagtgtgatccca
tcattcggaaatacggaggaaaaaaacaaggccttactagctatactctaactttagaag
agcagaaaaaaaatgactatcccataaaaggctcccctgaatgtaagggctatatatata
cagagtgtgatcagcagaggacggacagcagccccctctttggtctggattgtgaaatgt
gcctgactgcaaaagggagtgaagtcacacgtgtctctttggtggatgcacagggtcaat
gcctcttgaatgaactggtcaaacctgaaagcacagtagtgaactaccgcaccagattct
caggaatcacaaagaaaatgctgcttccagtgaaaacaacactgccagacatccaaacca
gactaaaaaaaatgcttccccatgatgcagtattggtcggtcattctctaaatgctgatc
ttcaggctttagaaatgatccaccctagtgttattgatacttcactgctttttgccagaa
atgagggtcgaagatttaagctaaaatttctagccaaagctgttttagggaaggagattc
agtgtgaacagaagcttgggcatgatcccacagaagatgctagagctgcattggaattgg
ctcaattctttattgagcaaggaccagcaaaggtagcagaactaaacttggagatgcttc
tgacagctgaaaaactggctgaggtctcacagagcaaagctgcgttacagccacaaggat
gtagggtccagaagcagttgaatgagcctccacatttatctaaaccatgttttttagact
acttgcgggtgactggccaaaaccccctccttttgggcagacaggaactagactcttctg
gcctgtgtcagagtaacctgagtgcttcaaacaaacagattcttcagagagccttagaag
atgttcccctgtccacattcagtgtcattcagttcagtttgggtccagagtacattgcat
ctcaccttcttgctggactttgtgaaaaggtgagaagcaagctgactgacatgctgacaa
tttacgcaggtccttttgaagaaagcttttgcctgaagtctgtgaaaaaagaatttggga
ggtgtggaccaatccgatctcttacagtggtaactgaaacgtaccagccctatgtctgta
tccaatatgaagtgctggaagctgcccagcttgctgtggaaagcctaaatggagctgagg
tagcaggatgccgcattaaggttcagagacctgtcactgcagcaatgttggactgtgatg
ttttgataaaggaactagaactggatgtggaaaatgaaggtgtgatttatgtggcgggtc
taaagaagtcaataacagagttggacttgcaagaagaattcagccagttgaaagacctgg
aaacactgttcctgccaaaggatctccagagtggaaggcacaggaactgctgtttcctca
aattccagaaatcacaaagtgctgtggatgcccttgaagttataaatggatggaccatga
agggtggcaaactaagaagtaggaacgctcttgcttcaggtcacctctggcgatggattt
ggcaaatgaatcacagcaatgggaagcaaggaggaaacatcttgtatgagaaaatggagc
aattatctgactctgagctaaagaaaaaggtgaagaagttagaccatcatatcaaaaagc
tttatagaagtctgcagaataacaccctgtgcattgttctctttcctggagtgaacagca
cgcatggatcacaatctggccttggtctgatggaaataaaagatgacggagggaggagtg
cttgttaa
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