Cariama cristata (Red-legged seriema): 104154604
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Entry
104154604 CDS
T08341
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccri03037
]
104154604 (IFT88)
Cilium and associated proteins [BR:
ccri03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
104154604 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_6
TPR_16
ANAPC3
TPR_11
SNAP
TPR_17
ARM_TT21_4th
TPR_10
TPR-S
TPR_15
ARM_TT21_5th
TPR_CcmH_CycH
HEAT_Nup120
ARM_TT21_C
TPR_MalT
DUF6584
Coatomer_E
ARM_TT21_2nd
FumaraseC_C
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
104154604
NCBI-ProteinID:
XP_009699561
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MMQNVHLAPEADEDDLYSGYNDYNPMFDTEDLENDAAFQQAARTSHGRRPPVTARIPGTS
ASRPLATGFGSKATLTSSMGRPMTGAIQDGVARPMTAVHAAGYTKATMRGSSFVPLGQAR
GPAPPLEVKNSDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERELVR
QREQIASPENINLDLTYSVLLNLASQYAANEMYAEALNTYQVIVKNKMFSNGGILKVNMG
NIYLNQQNYSKAIKFYRMALDQIPSDHKEMRIKIMQNIGVAFIKSGQYVDAISTFEHIMS
MSPNLKAGYNLTLCYFAVGNGEQMKKAFQKLIAVPLDVDDDDKYISPNDDPRTNLLIEAI
KNDSLRQIECERKSIAEEYIMTAAKLIAPVIETSFAAGYDWCVEVVKASRYVELANDLEM
NKAATYLRQRDFKQALETLKTLEKTDSRVKSAAATNLSALYYLENELAQATKYADLAVNS
DRYNPAALTNKGNTVFANGDYEKAAEFFKEALRNDSSCTEALHNLGLTYKKLNRTNEALD
CFLKLHAILQNSAEVFYQIANIYEIMEDPRQAIEWLLKLISVVPTDPHVLSKLGKLYDNE
GDKSQALHYYSESYRYFPSNIEVIEWLGAYYIDSRFWEKAIEYFERAALILLTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYMTKLEKVEKL
KEIREQRIKSGRDGSARSHREGNANG
NT seq
2239 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgaggctgatgaagacgatctttattctggctac
aatgattataatcccatgtttgacacagaggatttagaaaatgatgcagcttttcagcag
gcagcaagaacaagtcatgggagaagaccacctgtgacagccagaattcctggtacatca
gcttcaagacctttagctactggatttgggtcaaaggcaactttaacttcatctatgggc
agaccaatgacaggagctatacaggatggggttgctcgaccaatgacagcagtgcatgct
gcaggttacactaaggcaactatgagaggttcttcatttgttcctcttggccaagcaaga
ggtcctgctccacccctggaagtgaaaaattcagacagttcagaagagaagattaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgccaacagctgtggagac
ttgaaattggctctggaaaaagcaaaagaggctggaagaaaggaaagagaattggtgaga
caacgtgaacaaattgcttctccagaaaacatcaacttggacctgacttactcagttctt
ctcaatctggccagtcagtatgctgctaacgagatgtatgcagaagcactgaatacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtgaatatggga
aatatatacttaaaccaacagaactattccaaagctatcaaattttaccgtatggctcta
gaccagattcctagtgaccacaaagagatgaggattaaaataatgcaaaatattggagtt
gcatttattaaaagtggccaatatgttgatgcgatttctacatttgaacatataatgagc
atgtccccaaacctgaaggcagggtacaacttgaccctatgttattttgctgttggaaat
ggcgagcaaatgaaaaaagccttccaaaaactgattgcagttcccttggacgtggatgat
gatgacaaatacatttcaccaaatgatgatccacgtacaaatctactgattgaagccatt
aaaaatgacagcttaagacaaatagaatgtgagaggaaatccatagcagaggaatacatc
atgacagctgcaaaactcattgcaccagtaattgagacatcttttgcagcgggctatgac
tggtgtgttgaagtagtaaaagcttcccgctatgtagagttagccaacgacctggaaatg
aacaaagccgctacttacttgaggcagcgggattttaaacaggcactggagactttaaaa
acgttggaaaaaaccgatagcagagtaaagagtgcagctgcaacaaacctttcggccctt
tattatctggagaatgaattggcacaagcaactaagtatgcagatttagctgtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tatgaaaaagcagctgagttttttaaggaagctctcaggaacgattcctcatgcactgaa
gcacttcataatcttggtttaacatacaagaagttaaacagaacaaatgaagctttggat
tgttttctgaaactccatgcaatccttcaaaatagtgctgaagtcttttaccagatagca
aacatatacgagatcatggaagatccccgtcaagccatagagtggctcctgaagttgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaaattatatgataatgaa
ggtgataaatcccaagctttgcattattactctgagtcataccggtatttcccttcaaac
attgaggtcattgaatggcttggagcctattacattgacagccggttttgggaaaaagcc
attgagtactttgaaagagcagcacttatcctactgacccaagtgaagtggcagctgatg
gttgccagttgctacaggagaagtggtaactaccagaaagctctagagaaatacaaagtc
attcacagaaaattcccggagaatgttgaatgcctccgatttttagttcgtctctgcaca
gatatggggctgaaagaagtccaggaatatatgacaaagcttgagaaagtggaaaaatta
aaagaaataagagagcagcgcattaaatctggcagagatggcagtgcacgtagccacaga
gaaggaaatgcgaatggtg
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