Cariama cristata (Red-legged seriema): 104154932
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Entry
104154932 CDS
T08341
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccri03009
]
104154932 (DDX55)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104154932 (DDX55)
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
Pre-60S particles
Helicases
104154932 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
AAA_22
SBF_like
Motif
Other DBs
NCBI-GeneID:
104154932
NCBI-ProteinID:
XP_009702018
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAVIITPTRELAIQIDEVLS
HFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKSDGLDLASCVK
ALDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMMCKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKM
PELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKERQENGGKKKFIKNKAWSK
QKAKREKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQS
RLKAETVADLESEG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaagatgttgctgcagaagcggtaacaggcagtggcaaaaccttagcattt
gtaattcccatattggaaattcttctcagacgggaagaaaaattaaagaaaatgcaggtt
ggagctgtaattatcacaccaacgagagaattagctattcaaattgatgaggtgctatca
catttcacaaaacacttccctaggtttagtcagattcttttaattggtggtaggaatccc
atggaagatgttgaaaagtttaaagaacacggtgggaacatcattgtagctacaccgggc
cgtttggaggatctattcagaagaaaatcagatgggctggatctagcaagttgtgtgaag
gctcttgatgtgttggtattagatgaagcagacagacttctagatatgggctttgaagca
agtttaaatgccattctggactttttgcccaagcagagacggacaggtctgttctcagca
actcaaactcaagaggtggagaacctggtgagagcaggtctccggaatcctgtccgcatc
tcggtgaaagagaagggagtggcagcaagcaacacacagaaaactccaacacgcctggag
aactattatatgatgtgcaaagcagatgaaaaatttaatcagttggtacattttcttcga
cagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcatgtgtggaatactat
gggaaggctttggaatccttaattaaacaagtgaaaataatgagcattcatgggaaaatg
aaacacaagcgtaacaagatttttactgagtttcggaagctccccggtggcattttagtt
tgcactgatgtgatggcccgtggcatagacattccagaagtacactgggttttacagtat
gacccacctagcagtgcaagtgcctttgtgcatcggtgtggtcgaacggcacggattggc
aatgtaggcagtgcacttgtatttttgcttcccatggaagaatcttacgttaactttctc
tcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaacgtgttagatctt
cttccaaaactgaagtctatggccctagctgacagggcagtgtttgagaaagggatgaaa
gcatttgtgtcttatgtccaggcttatgccaaacatgaatgtaatctgatcttccgaata
aaagatctggattttgctagtcttgccaaaggttttgcattgttaaaaatgccaaagatg
cctgaactgagaggaaaatgttttccagactttactccagtcactgttaatacagactcc
atttcatttaaggataaaaatagagaaaaacagagacaaaagcaattagaacaacaaaga
aaagaaagacaggaaaatggagggaaaaagaaattcataaagaacaaagcctggtcaaag
cagaaagccaagagggagaagaaaaagaaaataacagctaaaaggaagcgtgaagagggc
tctgatattgaagatgaggatatggaagagttgctgaatgacacaagactcttgaaaaga
ttaaaaaagggaaaaattagtgaagaggagtttgagaagagactaacaggcagccaaagt
agactcaaagcggaaactgttgctgacttggagtctgaaggttga
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