KEGG   Cariama cristata (Red-legged seriema): 104155084
Entry
104155084         CDS       T08341                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ccri  Cariama cristata (Red-legged seriema)
Pathway
ccri03030  DNA replication
ccri03410  Base excision repair
ccri03420  Nucleotide excision repair
ccri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104155084 (RFC4)
   03410 Base excision repair
    104155084 (RFC4)
   03420 Nucleotide excision repair
    104155084 (RFC4)
   03430 Mismatch repair
    104155084 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccri03032]
    104155084 (RFC4)
   03036 Chromosome and associated proteins [BR:ccri03036]
    104155084 (RFC4)
   03400 DNA repair and recombination proteins [BR:ccri03400]
    104155084 (RFC4)
DNA replication proteins [BR:ccri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104155084 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104155084 (RFC4)
Chromosome and associated proteins [BR:ccri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104155084 (RFC4)
DNA repair and recombination proteins [BR:ccri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104155084 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104155084 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_30 AAA_16 AAA_22 AAA_11 DUF815 AAA_24 Mg_chelatase SLFN-g3_helicase AAA_28 AAA_14 RuvB_N AAA_19 AAA_5 TIP49_C DNAX_ATPase_lid AAA_7 ResIII
Other DBs
NCBI-GeneID: 104155084
NCBI-ProteinID: XP_009706023
LinkDB
Position
Unknown
AA seq 365 aa
MQAFLKGPSSISTKPLAAKERGAAGAAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTASGSRSDGKACPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLEVSEKEHVKISSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKETTDELLSVCQSGSFEKLETLAKNLINE
GYAVAQLVNQLHDTVVESKDYTDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCALVMQQ
LTQNT
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaaaggcccgtcttccatcagcaccaagcccctcgctgctaaggag
aggggcgcggccggcgcagcggggagcagcggggagggcaagaggctcaaacccatccct
tgggtggagaaatatcgtcccaaaaatgtggatgaagttgccttccaggatgaagttgtt
gctgtgctgaaaaaatccttggaaggtgctgatcttcccaacctattgttctatggccca
cctggaactggaaagacttccactattttggcagctgctagagaactctatgggcctgaa
ttattccggcaaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgatt
cgagaaaaagtgaaggcttttgctcagctaactgcatctggaagccgttcagatggtaaa
gcttgtcctccttttaaaattgtaatcctggatgaagcagactcaatgacttcagcagcc
caagcagccttaagacggacaatggaaaaagaatctaaaacaactcgtttctgccttatt
tgtaactacatcagcagaataattgaacctttaacatctcgatgctccaaatttcgcttc
aagcctttgtcagacaaaatccaacagcagaggctattggaggtttctgagaaggaacat
gtgaaaatcagtagtgaggcagtatcgtaccttgttaaagtgtcagaaggggacttacga
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaagagatcacagag
aagatagttactgaaattgctggggtcatccctaaagaaacaactgatgaactgctatct
gtctgccagagtggttcatttgagaaactggaaacactggcaaagaacctcataaacgaa
gggtatgctgttgctcagcttgtaaaccagctgcatgatactgttgttgagagcaaagat
tacactgacaagcagaaatctgtcatagttgagaaacttgcggaagtagacaaatgcttg
gcagatggtgctgatgaatacttgcagttggtgagtctctgcgcccttgtgatgcagcag
ctaacgcagaacacctaa

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