Cariama cristata (Red-legged seriema): 104155187
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Entry
104155187 CDS
T08341
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104155187 (DDX1)
03016 Transfer RNA biogenesis [BR:
ccri03016
]
104155187 (DDX1)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104155187 (DDX1)
Spliceosome [BR:
ccri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104155187 (DDX1)
Transfer RNA biogenesis [BR:
ccri03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104155187 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104155187
NCBI-ProteinID:
XP_009704298
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggctccttcctacagatatccaggcagaatctatcccactgatcctgggaggtggt
gatgtacttatggctgctgaaacagggagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgaaacactgaaggaccagatggaaggcaaaaaagggaaagcaact
attaaaaccggtggggcagtgctcaataaatggcagatgaacccgtatgatagaggatca
gcttttgcaattggatcagatggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggtgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatttgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattggatgttatctagacatagataaa
ggacaaataaaattttccaaaaatgggaaggaccttggccttgcatttgaaatcccacca
cacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccgaaagatggctatattggtctttgcaag
gctcccgatggtagtgttgtaaaatcacagcactcaggaaatgcacaggtggttcaaact
cagaaccttccaaatgctccaaaagcattgattgtagaaccgtcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgtcgataatcctaaattaagggaa
ctgttgattattggtggggttgctgcgagagatcaactctctgtcctggaacaaggagtg
gatattgtcgttggaactcctggaagactggatgacctggtctcaacaggaaagcttaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggattcacagtcaaattcctcagataacttcagatggaaagaga
cttcaggtcattgtgtgctctgcaacactacattcttttgatgtgaaaaaactgtctgaa
aagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcttgtaaatccaaaagctgacaaactctgggaaaggcttggc
aagaatcacatcagaactgatgaagtacatgcaaaagacaatacacgacctggtgctaac
actccagaaatgtggtctgaagctatcaaaatcctaaaaggagaatacactgttcgggcg
atcaaagaacacaagatggaccaagccattattttctgcaggactaaaatagattgtgat
aatatggagcagtacttcatccaacagggtggaggccctgataggaagggacatcagttt
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaacgtcacgctccctgatgaaaaacagaattatgtt
catcgaattggaagagtaggcagagctgagaggatgggtttggcaatctcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttacaat
actagactgaaggaagaaggaggttgtaccatatggtacaatgaaatgcagttgctgggg
gaaattgaagaacacttaaactgcactattgctcaagttgaaccagacataaaagtacca
gtagatgattttgatggcaaagttacatacgggcagaaaagagccctgggtggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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