Cariama cristata (Red-legged seriema): 104155240
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Entry
104155240 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03430
Mismatch repair
ccri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104155240
03460 Fanconi anemia pathway
104155240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104155240
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104155240
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104155240
NCBI-ProteinID:
XP_009701527
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
LQPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDHGAEVIEV
SDNGGGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKY
AKVGTRLVFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKVVCKNGXQL
LQAYCIVSKGVRINCTNQVGQGKKSSVVSTTGSLSLKENIAAVFGQKQLQNLIPFVQLPP
NEAVCEEYGLNATDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVN
EVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLMETFGSDV
NKLNVNQTLLDIAGNLKKTIPEETGKPQVEMLPDSEAENPSGEGKRIITLARLRESFSLH
QMTESNFRSPKKVKQQHSSPRQMSLDTTLCTVKTQKAVLTKKAESCHKMDSKMSSPSRYL
RKLEDNADSGFCRTPESDARCSTPEAGNCINSESVINPPEEEFCSSEQQLQNECLETVAC
SRKSLECDVQVLGAEQKLNQMNDWTTQNKVPQEANSSSPRVKIRSFKSEPDDFKAGECSE
VKNTRNCMPSVDVLVEVKKKTVPLEFSMKVLAEKVKKVIQQQRKTTETQNYRRFKAKINP
GENKVAEDELRKEISKEMFAKMEXHWPVQFRVYNSKVESDLFIIDQHATDEKYNFEMLQQ
HTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSK
NWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMRKLITHM
GEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2608 nt
NT seq
+upstream
nt +downstream
nt
cctgcaacctgccaaagccatcaagcccatcgaccgtaagtccgttcatcggatctgctc
gggacaggttgtgctgaatcttggcactgctgtgaaagagttggtggaaaacagcctgga
tgctggagctaccaacattgatataaaacttaaagatcatggagcagaggtgatagaggt
ttcagataatggaggtggagtggaagaggaaaactttgaaggcttgactctgaaacatta
tacatcaaagatacaagatttttctgatctaatacatgttgaaacatttgggtttcgagg
tgaagctctgagttcactatgtgctttaagtgatgttaccatttttacctgtcataagta
tgcaaaggttgggactcgtttggtatttgaccacaatggtaaaattactcagaaaactcc
ttttccacgacaacaaggaacaactgttaacatacagcagttattttatactttgccggt
gcggcataaagaatttcaaagaaacattaaaaaggtagtatgcaaaaatggtnnccagct
attgcaggcgtactgtattgtttcaaaaggagtgcggattaactgcactaatcaagttgg
ccaagggaaaaaaagctctgtggtatccactactggaagtcttagtttaaaggaaaacat
tgcagcagtatttggacaaaaacagttgcagaacctcattccttttgttcaattacctcc
taatgaagctgtttgtgaagaatatgggctcaacgctactgacatgccacaaaatcttta
tagtattacaggcttcatttctcgttgtgatcatggtgttggaaggagtacaacagacag
acagtttttctttatcaaccaacgtccatgtgatccagcaaaggttgtcaagcttgtgaa
tgaagtttatcacttatacaataaacaccagtatccatttgtggtccttaatatttgtgt
agattctgagtgtgttgacatcaatgtaactccggataaaaggcaaattttgcttcagga
ggaaaagcttttattagcaattttaaaaacttctctgatggagacgtttggtagtgatgt
taacaaactgaatgtcaatcagacacttctggacattgcaggcaacttgaagaagacaat
tcctgaagaaacaggaaaacctcaggtagaaatgctgcctgattctgaggctgaaaatcc
aagtggtgaaggaaaaagaataataactcttgccagattaagggagtcattctctctcca
tcaaatgacagagagtaattttcgaagccctaaaaaggtaaaacagcagcacagctcccc
tagacaaatgtcactcgataccactttgtgtactgtaaagactcaaaaggctgtcttgac
taagaaggctgagagctgtcataagatggactcaaagatgtcaagtccaagcaggtattt
gagaaaattagaagataatgcagattctggattctgtaggactcctgagtcagatgccag
atgtagtacaccagaagctgggaactgcatcaatagtgaaagtgtaattaatcctcctga
agaggaattctgtagctcagaacaacaacttcaaaatgaatgtcttgaaactgttgcatg
tagtaggaaatcattggaatgtgatgttcaggtcttgggtgctgaacagaagttaaatca
aatgaatgactggactactcaaaataaggtacctcaggaagccaatagttcttccccaag
agtaaaaatcagaagctttaaaagtgaaccagatgacttcaaggcaggtgaatgttctga
agtgaagaatactaggaactgtatgccaagtgttgacgtactggtggaagttaaaaagaa
aaccgtgccacttgaattctctatgaaggttttagcagaaaaggtaaaaaaggtaataca
gcaacaacggaaaactacagaaacacaaaattacagaagatttaaagcaaaaattaatcc
tggagaaaataaagtagcagaagatgaattaagaaaagagatcagtaaagaaatgtttgc
aaaaatggaanatcattggccagttcaatttagggtttataatagcaaagttgaatctga
tcttttcataattgaccaacatgctactgatgagaaatacaactttgagatgttgcaaca
acacactgttcttcaaggtcagaagctgatagtgcctcaaaatctcaatttaacagcggt
aaatgaaactgtattgattgaaaacctggaaatattcagaaaaaatgggtttgattttgt
cataaatgaaaacgctcctgtaactcaaagagttaaattaatatcattgccaacgagcaa
aaactggacttttggtccacaagacatagatgagctgatcttcatgttaagtgactgccc
tggagtcatgtgtaggccctcgagggtcaggcagatgttcgcttctcgagcttgcagaaa
atctgtgatgattggaactgcactcaatgtgcaggaaatgagaaaactgatcacccatat
gggtgagattgagcatccctggaactgccctcatggaaggcctactatgagacacatagt
cagtttagacctgatttcaccagaataa
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