Cariama cristata (Red-legged seriema): 104155258 Help Entry 104155258         CDS       T08341                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism ccri  Cariama cristata (Red-legged seriema) Brite KEGG Orthology (KO) [BR:ccri00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccri03021]     104155258 (SETX) Enzymes [BR:ccri01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104155258 (SETX)     5.6.2.5  RNA 5'-3' helicase      104155258 (SETX) Transcription machinery [BR:ccri03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104155258 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 AAA_22 UvrD-helicase AAA_16 SLFN-g3_helicase ResIII Helicase_RecD DUF4164 Motif Other DBs NCBI-GeneID:  104155258 NCBI-ProteinID:  XP_009692986 LinkDB All DBs Position Unknown AA seq 2815 aa AA seqDB search MSTCRWCTPSGSDTTEFLKSYASKRLSQEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE VLWELETSRLVAHIEKSMREETGEDDELFIVDENGQTQLSGFVGPDFENNLRVPLLEILK YPYLLLHEKVSELCVEVLCRMEQSHNSFQIFERYPGIYLFLVHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFENPDIYSLSMIEKGKLILLPSHLYDTANYKNYWL GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEATDDSTDPFWPALHCFMVILDQ LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMITCSQIVYN YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGREMRVHHSTFLWFIPFVQSL MDLKDLGVAYIVEVIHYLCSEIKDILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHCVRGSSALSLQASNSVQQACVQLIRSLL KEGYQIGQHTLCKQYLDKLNLLLRGNLSLGWQLNIQETQELQICLRQVIRTIKDRPLNTS VAAGNNANSTTLPAVSIKQEKSAHGDGCKMSARGRDDLCSPFAVILKEGGDEDCQENSFP RRKSAWEKECRDTCKSSTSWTSTEGPLVNIKKEANDLTTQECICPQNSLATKVCGKVQEN GNDDLVVGKYNTDNQCFNPSAQRSDFRRGGELENKCETEPITPVRLAAQTCIGSPEHICS SDIKESNMSSSSSSKFKVDAQRLMNLKNKVQKTEWPSKVLQLVKPRDLKNCSLPTSASKA EVEQPKFCTRYLFTGKDCHKHQGANTVCENEISVDTPASRSCGSMQEKSVNSVFQSRLVP TKQVSKGTPRTWPTSSKDEPGMQENEDDSILLSGISDTLLKKVSTEEKSNSLLKSVFKTD TDMQPSDWEQPNLNDLVKGQISKTLCMDKTSANGHVPSSSENKRDISNPASQIRPLSMKC ESSDRLFEFSEYFKRENSVGKKEEDFVKVASEDHTLTDSQVDRELSKLSLSAYAKSVNFL FDSSEDDSVHDNVCDIKRKVKGAVRSSSDGQSTKSPCDADCLDKKVIIISDSSDEEKDVA DKEETKEINKNVCPEKQPSTPSCVSDSDIKIESKTASSPLSLEDCESQYFEFETEVDVFS VWQDTQAYSMEATQEYKQDCVSTSVDRCNSDGLLNDHTNEWGYDVDYISDDTAEEAANLI EKQIEHISLQKEADNTKEVTNSTLQESISKGNAKVPLENFADKGTVAKDFTLDSKLTEPR ASTSNISLASKLALKKNSASPRKNIAKSQVARTIQRSPKKPPVLKTAQNKKLLQSMPKNS QPGRSMPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLDSLARLRSYGEAAGR VGVPQKQKIKLIAPQSLSIKHNKKLLACQDLQFLRQTRPQKSVRMKNLAGSSESRNKKVS KVDAKSMKQNPKSVKLASVAASLENPREKKREESVFPSASERKFESLSVEEEACVSKMPH SSDSSRKSEDHDMMIPPVPVDSSLSSTALGGDKDEPSGKGCIVQPECEKTTSKENGCRPN ENSEDDDDLFLTQLDPVDMELCSEEESVQDVTVSSKITEEMDTAESVQQNESLTVVKCKY KDCMEKVEKAGEYCSKHSATSSGADHMFAKPLLPPSKTRKPSTTKIFSSASSSRSAAFSK DLEDVKKLPPASKSKVNAAKPVVVRPPKAKAIPVGNQTCKHPSFSNVPQPRISDNVLQSQ NRHNNNASNISRRPGQETYYPSFLGAQQRDHSIFVNEVLKWTYEMFANSSQFGPPSILLQ SVVASVPVQFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFYLQNFSADLNT ANFTAHFQESDLARQLHPKEDDLIFLVVQKKKDSFREESEMENHIVNHVGLVTRFSRASG CLTRQKEQHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTQRTFKGLLLLSRSPLAKPI INPSYNDFCPRDLPVASESAASDMNEYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGT GKSKTIVGLLSRVLRENTRNEKTTPKKSKIKPNRFLVCAPSNAAVDELMKKIILAFKEKC QNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKKKAALD QKLDMLSRQRAMHRCEKRESQMLDDEIGRLSKERQHLASQLKEVRGHSQKVQADIILESD IVCCTLSTSGGNLLESAFSRKGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPR QLPPTVKSVKAQEYGYDQSLMARLHRHLEEQVRKNVLRSLPVVQLTVQYRMHPDICLFPS NYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEVKLVMELIRT IKEKRKDLGLRRIGVITPYSAQKKKIQEQLDRVFRNNSPGEVDTVDAFQGREKDCIIVTC VRAHSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQKRGAIIK TSEESYRKDAVKILKFKATVQPPTKAGTKNSPLLQACSSSSKRGELANPRELTAGTGHVV PQGSRGSQQPQGARAADPRRGSDSATVEAPSPPADPEKFFYPRLARMASRTETKGKEQAS KDSSRSAQSNRGSTSQRGLDVSSAARDQISRTETSKKPQRAMGQCDVPSTSPYAARHEGD QRAAVSKSSSKAHSEGGQSNSGKRNKDYRVSTWRTSEELPENTESNSAKRRKTSH NT seq 8448 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaagagc tatgcttctaaacggttgtcccaggaagatcttgaaggatccaatgatgatctctgttac tgcctggaatgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag gtcttgtgggagttggagacctcccgtcttgttgcccacattgagaaatccatgagagaa gaaactggagaagacgatgagttgtttatagtggatgagaatggacagacacagttgtct ggttttgtgggcccagattttgagaataacctgcgagtaccccttctagaaatactgaaa tatccgtatctgctgctgcatgagaaagtcagtgagctgtgtgtagaagtgctctgtaga atggaacaaagtcacaactcctttcagatctttgagagatatccaggaatttatctcttt ttggtacacccgaatgaagtgattcgtcgatgggccatcctaacagcgaggaatttgggg aaggttgacagggatgattactatgacttacaggaagtgttgacgtgcttgttcaaagtt attgaattggggctttttgagaatccagatatttacagcttgtcaatgattgaaaagggt aaactcatccttctgccatctcatttatatgatactgccaactacaagaactattggcta gggatttgtatgttgctaacagtgctggaagaacaagctatggactccttgttactgggc ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcaacc gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa tctgaaccggagtcagactacaatgatgacatgattacttgcagtcagattgtgtataat tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac tgccccaacatgtacgaagatatgcaaacactggctaatgtgcttcagtctgatattggc agagagatgcgtgtccatcacagcacgtttctgtggttcatcccttttgttcagtcgctt atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg gaaatcaaggatattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt ctcctgatcttggtgtccattattgaactacacagaaataaaaagtgcctgcatttgcta tggattagctcccaagaatgggtggaagcagtggtgaggtgtgctaagcttccagctata gcatttacacggtgcactgaaaaagcatctggacattgtgtgagaggttcatcagcgtta tctttacaagcttctaactctgtgcagcaagcctgtgtgcagttgatacgcagccttctt aaagaaggctatcaaattgggcagcatactctttgcaagcagtacctagacaaactcaat cttcttctgcgaggaaatctatctttaggttggcagctgaacatccaggaaacccaggaa ttacaaatatgtttaaggcaagttataagaactataaaggacagaccattgaatacctct gtggctgcaggaaacaatgcaaactctacaactttgcctgccgtttctataaagcaagag aagagtgcacatggtgatggatgcaagatgagtgcacgtggcagagatgacctttgttca ccatttgctgtcatattgaaggaaggtggagatgaagattgtcaagagaactcgttccct agaagaaagagtgcctgggaaaaagaatgtagagatacatgtaaaagttcaacctcttgg acatccactgaaggccccttggtgaatattaaaaaggaagctaatgacttgacaactcag gaatgcatctgcccacagaactctttggcaacaaaagtatgtgggaaggttcaggaaaat gggaacgatgatcttgtggtagggaaatacaatacagacaatcagtgttttaatccaagt gcccagcgttcagatttcagaagaggcggagagttggaaaacaaatgtgaaacagaaccc ataacaccagtgcgtctggctgctcaaacttgtattggttctccagaacatatttgcagc tcagatataaaggaaagcaatatgtcttctagttcctcttcaaagttcaaagtagatgcg cagagactcatgaatttgaaaaacaaggtacagaaaactgaatggccctcaaaagtattg cagctagtgaagccacgtgacttgaaaaactgcagtttaccaacgagtgcttcaaaagca gaggtagagcagcctaagttttgcactcgctatctttttacaggcaaagattgtcataaa catcagggagcgaatactgtgtgtgaaaatgaaatctctgttgatactccagcttcaagg agttgtggaagtatgcaggagaaaagtgtcaacagtgtttttcagtccagactggtcccc actaaacaggtgtcaaaaggaacaccacgaacttggcctacctcctctaaagatgaacct ggtatgcaggaaaatgaagatgacagcattttgctttcagggattagtgacaccttactg aaaaaagtatccactgaagaaaaatcaaattcattattgaagtctgtgtttaagacagac actgacatgcaaccttcagactgggaacagcctaatttaaatgacttggttaaaggtcag atttcaaagacactttgtatggataaaacttcagcaaatggccatgttccatctagctct gaaaacaagagggatatatccaaccctgcttctcagatcaggccactgtcaatgaagtgt gaatcaagtgacaggttgtttgaattttcagaatatttcaagagagaaaattcagtgggg aagaaagaggaggattttgtgaaggtggcttctgaggatcatactttgacagactctcag gtagatagagaactcagtaaattatctttatctgcgtatgccaaaagtgtcaattttctc tttgattcaagcgaagatgactcagtacatgataatgtatgtgatattaaaaggaaagtg aaaggtgctgtaaggtcttccagtgatggccaaagtactaagtctccctgtgatgcagat tgccttgacaaaaaagtcatcataatttcagactcttctgatgaagaaaaagatgtggct gacaaagaggaaacaaaagaaattaataaaaatgtatgtcctgaaaagcagccttcaact cccagctgcgtttctgatagtgatatcaaaatagaatcaaagacagcaagctctcccttg tcactggaagactgtgagtctcagtactttgaatttgaaacagaagttgatgtcttttcg gtttggcaagatactcaggcatatagtatggaagcaactcaggagtataaacaagattgt gtttcaacatcggttgacagatgtaattcagatggtttactgaatgatcacacaaatgaa tggggttatgatgtggattacataagcgatgataccgcggaagaagcagcgaacttgata gaaaagcagatagaacatatttctcttcagaaagaagctgataatacaaaagaagtaact aattcaacattgcaagaatctattagtaagggaaatgcaaaagttccactggagaatttt gcagacaaaggtactgttgctaaagacttcaccctggattcaaaattgactgaacccaga gcatctacatctaacatttcattagcttcaaagttggcccttaagaaaaatagcgcaagc ccacggaagaatatagcaaaatctcaggtagccagaactattcaaagaagtcctaaaaaa ccacctgttcttaaaacagcacaaaataaaaaactacttcaaagtatgccaaaaaattct cagcctggcaggtcaatgcctgctgtggttcctccaaggaaagttcggcagtgtcctgca ccagcatcaactgtagaaaaacttggtctgaagaaggcaccccgcaaagcgtttgaatta tcccagcgctctttagacagtctagctcgcttgcgcagctatggcgaagctgcagggaga gttggagttccacagaaacagaagattaaactaattgctcctcagagtttgtctataaaa cataataaaaaactcctagcctgccaagaccttcagtttttaaggcagacaaggccccaa aaaagtgtcagaatgaaaaatcttgcaggaagttctgagagtagaaacaaaaaagttagc aaagtggatgcaaaatctatgaaacaaaaccctaaaagtgttaaactggcatctgttgca gcatctcttgaaaacccaagagagaaaaaaagggaggagagtgtttttccctctgccagt gagagaaaatttgaaagcctctctgtggaggaggaggcatgtgtctctaaaatgcctcat tcttcagactcaagcagaaaatcagaggatcacgatatgatgattcctcctgtacctgtg gattcaagtctctcttccactgcacttggaggtgataaagatgaaccttcaggaaaaggt tgcattgtccagcctgagtgtgagaagacaacttcaaaagaaaatgggtgtagaccaaat gaaaacagtgaagatgatgatgatctgtttttaactcagttagatcctgtggatatggaa ttgtgttctgaggaggaaagtgttcaagatgttactgtatctagtaaaataacagaggaa atggatactgctgaaagtgttcagcagaatgaatccttgactgttgtgaaatgtaagtac aaagactgtatggaaaaagtggaaaaagcaggggagtactgtagtaagcattcagccacc agctcaggggcagatcacatgtttgccaaacctctcctgccaccttctaaaacaagaaag ccttccactaccaaaattttcagctcagcaagttcttcacggagtgcagccttcagcaag gatcttgaagatgttaaaaagctaccaccggcttcaaaaagcaaagtgaatgcagcaaaa ccagtggtggtcaggccaccaaaggcaaaggctataccagtaggaaatcaaacatgcaag catccaagtttcagtaatgtacctcaaccacgtatttctgataatgttctccagtcacaa aatagacacaacaacaatgcttcaaatatttccagaaggcctggccaagaaacgtattat ccttcctttcttggtgctcagcaacgtgatcatagtatttttgttaatgaagtcctgaag tggacttacgaaatgtttgcaaactccagccagtttggacctccaagtattctcctgcag tctgtagtagcctctgttcctgtccaatttcagggatacaatgactattttaatacattt ttccccttgatgatgctaaatgcctttgaaacactggcacaagagtggatagaaaaccag agagtaagagagaagagctactacttctacttacagaacttctctgctgacttgaataca gcaaattttacagctcattttcaagaaagtgatttggcaaggcagcttcatccaaaggag gatgacttaatctttttggtggtccaaaagaaaaaagacagctttagggaagaaagtgag atggagaaccatatagtgaaccacgttggtcttgtgacacgattttctcgtgcatctggc tgtttaactagacaaaaggagcagcataccgtctgtcatctttctgtgcaaactcgaggc aatttgtcattcttcataaacaagcaagtgaagtgtgtggtggttggctccctggtgacc acacagcgaacattcaaaggtctactgttattgagcaggagtcccctggctaaacccatc ataaatccaagttacaatgacttctgtcccagagatttgcccgtagcttcagaaagtgct gcatcggatatgaacgaatacaatgaagatcaaaagagagccattgagacagcatatgcc atggtaaagcaacatccaggacttcccaagatctgcctcatccatggaccacctggaaca gggaaatctaaaactattgttgggcttctgtctcgtgttttgagagaaaacactaggaat gagaaaacaacccccaaaaaatccaagatcaagccaaaccgttttctggtttgtgcacca tcaaatgctgctgttgatgaactcatgaaaaagatcatccttgcatttaaggaaaaatgc caaaacagacaggagcctttgggaaattgtggtgatatcaaattagtgcgacttggtgct gaaaaagcaatcaacagtgaagtccggggatttagcctggataagcaagttgaacataga atgaaacgaaaaccagctgattgtgaccaggatattcagaagaaaaaagcagctctggat caaaagttggacatgctgtctcgtcagcgtgccatgcacagatgtgagaagagggagagt caaatgttagatgatgaaattggcagactttcaaaggagagacaacatcttgcttctcaa ctaaaagaggttcgggggcactctcagaaagtacaggcggatatcatcttggagtccgac atcgtctgctgcaccctgagcacaagtggaggaaatctgctggaatctgctttttcacgg aaaggacttgatcctttcagctgtgtcattgtggatgaggcagggcagtcctgtgaggtt gaaacactgattccactgatccatcgctgtaataaacttgttcttgttggagatcccaga cagctcccgcctactgtaaaatcagtaaaagctcaggaatatggttatgatcagtccttg atggcacgcctgcacagacacctggaggagcaagtgcggaagaatgttttacgaagcctg ccagttgtgcagctgactgtgcagtaccggatgcaccctgacatctgcctcttcccatcc aattatgtttatggcaggactctaaagactgacaaagcaacagaagagaacagatgttct tcagagtggccattccagccctaccttatttttgatgtaggagatggtcgtgaggagcga gacaatgactcttttagtaatccccaggaagtgaaattggtgatggaattaattagaaca attaaagagaaaaggaaggatctgggtcttcgtcgcatcggagtaattaccccttacagt gcacagaaaaagaaaattcaagaacagctggacagagtgtttaggaataacagcccagga gaagtggacacagtggatgcattccagggacgagagaaagactgcatcatagtgacgtgc gtccgggcacacagcactaaaggctcaattgggtttctggcaagtcttcagcgtctgaat gttacaattacccgagccagattcagcctcttcattcttggaagactgaaaacgctcatg gaaaataaagactggaatgagttgattcaggatgctcagaaaagaggtgccattatcaag acatcagaagaaagctacaggaaagatgctgttaagattttgaagttcaaggcaacagta cagcccccaaccaaagcagggacaaagaactctcctctgttgcaggcttgttcttccagt agcaagaggggtgagcttgcaaatccaagagaactcaccgctggcactggccacgtggtg ccgcaaggaagcagggggtcccagcagccgcagggggctcgggctgcagaccccaggaga ggcagtgactccgcaaccgtggaggctccatcacctcctgctgatccagagaaatttttt tatccaaggctggcacgtatggctagtagaactgaaacaaaaggaaaggagcaggcctcg aaagacagcagtcggtcagcccagagcaatcgaggatcaacatcacagcgaggccttgat gtgtcctcagctgccagggatcagatttccagaacagaaacttctaagaagccccaacga gcaatgggacaatgcgacgtgccttccacgtcaccttatgcagctcggcatgagggtgac cagagggctgctgtatcaaaaagcagttcaaaagcccacagtgaaggaggtcaaagtaat agcggtaagcggaacaaagactatcgtgtttcaacgtggagaacatcagaggaattgcca gagaacacagaatcaaacagtgccaagcgaagaaagacctctcactga

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