Cariama cristata (Red-legged seriema): 104157278
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Entry
104157278 CDS
T08341
Symbol
SCAF8
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104157278 (SCAF8)
03041 Spliceosome [BR:
ccri03041
]
104157278 (SCAF8)
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104157278 (SCAF8)
Spliceosome [BR:
ccri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104157278 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104157278
NCBI-ProteinID:
XP_009692863
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAGGNSPXTPVL
PSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQL
IQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDR
FDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPQ
KASPEENQEGNFGSEHSASPSQGSSQQQFLEAETNVDDSMDIQQQDMDIDEGQDGAEEEI
FEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSY
SSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESI
NMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDL
GVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEAAKENTQTTQSAAVEKSTVI
TTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFNPSQ
PPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLVQPPLPIAQETMKDVPFTSLVLPVGTVT
SNLATPTLSAGSVFNPLPINKPESDEKGSHLTDLQISSSENSRSVQSDVSSSSGLVGGVQ
PPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPSVSSSSGLVGGVQPPIVSSSSGLAGGVQ
LPTVSSSSSLAGGVQPTNVSSGSGLMAGVQPPNVSSNSGLLAGVHPPSVSSSPGLLTGMQ
LPNVSSSSGVLAGVQPPSVSSNSGILIMPPPNVSSSSGLMGVPPPNISSSSGLLAMQHPT
GVQNMPHLNISSQRMXXXXXXXXLMPHSPGPRFPLMQPGIPPQRSIPPPAILDPSLHPPP
RGPFPPGDIFNQTERPFGTPGRQNMDSISNAEKRLPLGGDXXXXXXXXXXXQEGDRDYRF
PPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVDGREHFARPHVDMRENFGRPGMD
NLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFESRSGPN
WNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVF
EYFDGATSQRKADNMPQVNGENTETESQQPTAQVQDDPELYEKLTSSVEINKEKNDTEAD
IESEPVVESTETEGT
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaagcacgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtacctggcctgtatgtc
attgactccattgtgagacagtcccggcatcagtttggacaagaaaaggatgtatttgct
ccaagatttagcaataacatcatcagcactttccagaacttgtaccgttgtcctggggat
gacaagagtaaaattgttagagtgctaaatttatggcagaagaataatgtgttcaagagt
gaaattattcagcctctcctggatatggcaggagggaattctccanngacccctgtctta
cccagcactacagctgctatgagcaacaatacaccaggaacacctgtgactccagttact
ccagccaatgtggtgcagagtttacctgatccttgggtatctcagattgctaatacagat
acacttgctgctgttgcacagattttgcagagtcctcaaggccaacagcttcagcaactg
atacagacactgcagatacagcagcagaaacctcagccatcactacttcaagcccttgat
gctggtcttgtcgttcagttacaggctctgacagcacaacttacagctgcagctgctgct
gctaacacactaaatccgctggaacagagtgtctcttttaataagaagctgatggacagg
tttgactttggggaagaatctgaacaaaatgaagagcctaaaaaggaaactcccacttcc
caactgcctttagtaccagaatctgtgaacaactcactttttcaccaactagctgaacag
ctacagcaacaaaatttagaacatctcagacaacaacttctggagcaacagcagcctcaa
aaggcaagccccgaggagaatcaagaaggaaattttggttcagagcactctgcatcacca
tcacaagggagtagtcaacagcagttcttagaagcagaaacaaatgtagatgattcaatg
gatattcaacaacaggacatggatatagatgaaggacaggatggtgctgaagaagagatt
tttgaacaagaagagaagaaatcagctgttcgttcaagatcaagaactcgttcaagatct
cgttcaaggtcaccaagaaaacgaaggtctagatcacggtctggttctcgtaagcgtaaa
cacagaaaacgttcacgctccagatcaagagaaagaaagagaaagtcatctcgttcatat
tccagtgaaagaagggctagggaaagggaaaaagaacgtcagaaaaagggattacctccc
atacggtcaaaaacactaagtgtttgcagtactactctttgggtaggtcaagtagacaag
aaggctacacagcaagatttaactaacttgtttgaagaatttggacaaatagagtcaatt
aatatgattcccccaagaggttgtgcttatgtttgtatggttcacagacaagatgcgtat
cgtgctcttcagaaacttagttctgggtcctataaaattggatctaaaattattaagatt
gcctgggctttgaacaaaggtgtgaaaacagaatacaagcaattctgggatgtggatctg
ggagtttcatatattccttgggagaaagtaaaattggatgatttggagggctttgctgaa
ggtggcatgattgaccaggaaacagtaaatacagaatgggaaacagccagaagctcagaa
gctgctaaagaaaatactcaaactacacagagtgctgcagttgagaagagtacagttatt
acaacacagacggaagcttacacacaaccagtcactatgctgcagattccagtagctcca
gctgtgcctgctgttagcttggttccacctgcatttcctgtcacaatgtctgtccctcct
cctggttatagcgcaattcctcctccgcccttcttgcgagcgagtttcaacccttcacag
ccacctccaggttatatgcctcccccagttccgcctgtggttccgccacctgttgtccca
ccacctgttgtcccaccagttgttccaacacctttagtacagcctccactaccaattgca
caagagacgatgaaggatgttccttttactagccttgttctaccagttggcacagttact
agcaatctagctactccaacattatctgctggaagtgtttttaatcctctgccaatcaac
aaaccagaatcagatgaaaagggatcacatcttacagaccttcagatttcttccagtgaa
aacagtagatctgtgcaaagcgatgtctcgagtagctctggacttgttggaggagtgcag
ccgcccagcgtctcaagcagttctgggcttactggagaagggcaaccacccagtgtctca
agtagctctggacttgcaggtggagtacagccacccagtgtttcaagcagctctggactt
gtaggaggagtgcaaccaccaattgtttcaagcagttctggtcttgcaggaggagtgcag
ctacctactgtctccagtagttcttctcttgctggtggagttcagccaaccaacgtctcg
agtggctctggacttatggctggagtgcaaccaccaaatgtgtcaagtaactcagggctt
ctagctggagtgcatccacccagtgtctcaagcagccctggccttctgacaggaatgcag
ctacccaatgtctcaagcagctcaggagttctggcaggagtacagccaccaagtgtctcg
agcaactctgggattctcataatgccaccacccaatgtttcaagtagttctggacttatg
ggagtgccaccaccaaatatttcaagtagttctggacttctggcaatgcagcatccaact
ggggttcaaaacatgcctcatttaaatattagtagtcaaaggatgnnnnnnnnnnnnnnn
nnnnnnnncctaatgccccattcacctggaccaaggtttccattaatgcagccgggaata
ccaccgcagcgtagtattcctcctccagcaatccttgatccatctcttcacccaccacct
cgaggtccttttcctccaggagatatttttaatcaaacagaaagaccttttggaacacca
ggaagacaaaatatggatagcatttctaatgcagagaaaagactaccacttggaggcgat
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcaggaaggagacagagattatcgcttt
cctccagtagaaaacagagataatcttaacaggccatctccagtggatgtcagagattct
gttggacgaccaccggttgatccaagagagggtataggaaggcctccagtggatggaaga
gaacactttgcaagaccacatgtagacatgagagaaaattttggaagaccaggtatggat
aaccttggtcgaagagagcattttggtttcaattcagacaagcactggggacagagagga
gattatgatgagagagagcaccatgccttccctatttatggtggcccgaaaggcttccat
gaagacagagagaggtttcggcatgtaaactatagatttgaaagtagaagtggtcccaat
tggaatagaggatttgaacaagatgctcacagagattttgatgaccgcagaagaccctgg
gagagacagagggatagggatgacagagattttaatttttgcagagaaattaatggaaac
aggtttggaagagacagaatgtcaaacaactggatcccccctccgcatccacgggttttt
gaatattttgatggggccacttcccagcgcaaagccgataacatgccccaggtaaatggt
gaaaatacagagacagaaagtcagcaaccaactgcacaggtgcaggacgatccagaactt
tatgaaaaactgacatcttccgttgagataaacaaagagaagaatgacacagaagctgat
atagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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