Cariama cristata (Red-legged seriema): 104157333
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Entry
104157333 CDS
T08341
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04382
Cornified envelope formation
ccri04510
Focal adhesion
ccri04512
ECM-receptor interaction
ccri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104157333 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104157333 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104157333 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104157333 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccri04147
]
104157333 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ccri00536
]
104157333 (COL4A2)
Exosome [BR:
ccri04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104157333 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ccri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104157333 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104157333
NCBI-ProteinID:
XP_009692931
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
CGQVTEDFSRGDGTEPIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPVGYPGL
NGTRGDPGREGFPGPPGFTGPRGDGGPNGLPGLQGHPGLTGKPGTPGAAGLKGFPGDVLG
AAAGSRGDVGLPGFPGLKGLPGDQGVPGARGADGNPGLPGPKGDPGPQGLPGLMGLPGIP
GTRGFPGLPGNPGPDGRPGPQGPVGPPGARGEDGEQGFPGPVGLKGLSGDKGETGYPGLQ
GVPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMTGLKGRSGIKGIKGEFGPFGARGDK
GAEGARGIKGDRGDQGPPGEPPKLKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGIP
GKTGIPGSPGHPSYVAGTKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGIPGI
SGHFGTPGSHGEIGEQGDTVNLPGMPGLKGEVGVPGLTGTRGGTGQKGESGDPGFPGIEG
LKGTQGVPGSVGLKGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAGFPGLRGISG
LHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKGEAGEPSRVEGTRGPPGQKGDRGVPGVQG
PFGIXXXXXPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQTGVSG
QIGPKGSRGDPGLAGTPGIPGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRGVTG
FQGPPGSPGLPPLPPRLVAEQGSPGLPGNTGPQGSPGDMGPQGPPGDPGFRGAPGEPGLQ
GRGGITAPPGPRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYANR
NDKSYWLSTTAPLPMMPVAEDDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTID
QPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
3158 nt
NT seq
+upstream
nt +downstream
nt
actgtgggcaggtcactgaagacttttctagaggagatggaaccgagccaatatggtcag
gcgcaggctgcgtgaggccaccaaagggatcccagggcaagccgggagtgccaggagcca
caggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccagggc
taaatggtacacgaggtgatccaggtcgggagggattcccaggtcctccaggttttactg
ggcccaggggagacggggggccgaacggtctacctggactgcagggacacccaggcctta
caggaaaacctggcaccccgggagcggcaggactgaagggctttcctggtgacgtcttgg
gagcagcagcaggttcccgaggggatgtcgggctccccggcttcccagggttgaaaggct
tgccaggagatcaaggagtaccaggagctagaggagcagatggtaatccaggtttgccag
gacccaaaggagatccagggccacaaggtctccctggtttgatgggattgccaggaatac
caggaacgcgtggattcccagggctaccaggaaaccctgggccagatggcaggcctggcc
ctcaaggacctgttggtccacctggtgctaggggagaagatggtgagcaaggttttcctg
gccctgtgggcctgaaaggtctgtccggtgacaaaggtgaaacaggctacccgggattac
aaggtgtgcctggcgtgactggtccccctggcataagtggaatggatggctttccaggag
ataaaggctcaagaggttcacctggcattgacggtttcaaaggcatgacaggcctaaagg
gaagatcaggcatcaagggaatcaaaggagaatttgggccattcggggctcggggtgata
aaggcgcagagggtgcacgcggcattaaaggtgaccgtggggatcaaggccccccaggag
aacccccaaaactcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgttg
gagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcattc
ccggaaagacaggaattccagggtcccctgggcatcccagctacgtggctggtacgaaag
gggacatcggtgcgaaagggctgacaggtctgaaggggtatcctggcccagccggctctc
ctggcatcagaggcttccctggcagcacaggaggcaggggagaaaagggtattccaggaa
tttcaggccattttggtactcctggctcacatggtgaaataggtgagcagggagatactg
taaacttgcccggaatgccaggccttaaaggggaagttggtgtaccaggcttaacaggca
caagaggaggcacaggacaaaaaggcgaaagcggtgatcctggtttccctggcattgaag
gcctcaagggcacgcagggtgtccctggctctgtgggactgaaaggtttgccagggctgg
tcggccccccggggcagcaaggaagccctgggacacctgggtttcaaggtgaaaaaggaa
ctccgggctggcctggcttaccaggacaagcaggctttcctggcttaagaggaatcagcg
gactgcacggtttaccgggcaccaagggcttaccaggatcaccaggtccagatggctatg
gctctgcaggcttcccaggggcagtgggtgacaaaggggaggccggagagccgagcagag
tggaaggcacccgaggacctccgggtcagaagggagacagaggtgttccaggagtccaag
gaccctttggcattnnnnnnnnnnnnnnncctcctgggatttcaaatatatcaggatatc
ctggtgataaaggctccccaggtctcgacggggtgccaggctatccaggactacaggggc
agcctggaataccggctccaccaggaagcaaaggagaaagtggacaaacaggtgtgagtg
gacaaatcggccccaaaggaagcagaggtgatcctggattagcagggacacctggcattc
ccgggtaccctggaccaaaaggtcgtaaaggtgaacaaggtgtcatcggctttatgggca
cagtaggatttccaggtgatttaggacccatcggacccaaaggggatagaggagtaactg
gctttcagggccctccaggctctcctgggctgccccctcttcctccaaggctggttgctg
agcaaggttcaccaggtctccctggaaatacaggacctcaaggaagcccaggagatatgg
gacctcagggtccaccaggcgatccaggtttcagaggcgcacctggagagccgggactcc
agggcaggggtggcatcacagctcctcccggccccagaggtgaacaaggagcaacagggt
ttcagggtccagtgggatttgaaggtcagccaggccgccccggtagccccgggctgcccg
gcatgccgggtcgcagcgttagcatgggctacttgctggtgaagcacagccagtccgacc
aagagccgatgtgcccggttggcatgaacaaactctggagtggatacagcctactgtact
ttgaaggacaagagaaggcacacaaccaggatctagggctggccggctcatgtttggctc
gtttcagtactatgccattcctctactgtaaccctggggacgtttgttattatgcaaatc
gaaatgataaatcctactggctctcaactacagcacctcttccaatgatgcctgtggcag
aagacgacattaggccgtatatcagtcgctgctcagtttgtgaggccccagctgtggcaa
ttgctgtccatagccaagaagcttctattcctcactgccctgaaggctggcgcagtttgt
ggattggatattccttccttatgcacactgctgctggggatgaaggtggaggacagtccc
tggtttctcctgggagctgcctggaagatttcagagcgacgcctttcatcgaatgcaatg
gcgcacgcggaacctgtcactactttgcaaataaatacagcttctggctcaccaccatcg
accagcccttccaaagcaagccctcggctgatacactcaaggcaggactcatccgaagcc
acatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
