Cariama cristata (Red-legged seriema): 104157343
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Entry
104157343 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04270
Vascular smooth muscle contraction
ccri04625
C-type lectin receptor signaling pathway
ccri04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104157343
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104157343
09153 Circulatory system
04270 Vascular smooth muscle contraction
104157343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccri04131
]
104157343
Membrane trafficking [BR:
ccri04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104157343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104157343
NCBI-ProteinID:
XP_009692942
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
QKRSMGLTLAEGELTKLDAERVRXXXXXEXCAEQIIAKIEEVLMTSQPLEEDKSSTMQYV
ILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILGPPRRP
SRHDSSAIGRAMEMQKPRHPKHLPTASSVSPEPPDPSKMRQSGSSSDGTDVPYPPANPMS
PLAMGPFSSPEGSKDSETSLKQTGEAPPANDCVDGTPRTPNNTFEFPSPLENLQEEEGES
ERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDTDVDPSNWQQLVTREVLMGLKPYEIKR
QEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHVALNDQ
MKAIRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQKKDSRF
QTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKAADHCR
QILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHEGPLTW
KVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLNTVLVR
QVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSTRRVIPLPQS
GPGEEEREEEEQQKLKEQHDISASSLQSPDKDLGLESPLILNAQSSSPVLSEKSKVESLL
VSERQFDKVQQADLTLKDSSVCYERPTTSLPSVSEGQWALDALRNLGLLKQLLVQQLGFS
EKGTVEDRQRFPRCRTVSQEAQTESGNEPGLQHSDNNKFHRPGTDRMLPRTGTSESTASY
GLRTSAELPASGDAVQLIVRDPRSSSNLAIDHMSMNLEISATELEGVGADESGEHFFDAR
EAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQCTAGGR
TSLDSAQQQPLSPRDTQSDGGNSPFAEEMMASRWGGVEESCSFVASPHFSIESRVQMMQY
IQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSDKS
NT seq
3181 nt
NT seq
+upstream
nt +downstream
nt
gcagaaacgtagtatgggattgaccctggcagaaggagagctaaccaaactggacgcaga
aagagttcgtnnnnnnnnnnnnnnngagncatgtgcagaacagattattgctaaaattga
ggaagtcttgatgacatctcagcctttggaagaagacaagagttccacaatgcagtatgt
gattcttacttacatgaaacacctgggagtcaaagttaaagaacctcggaacctggagca
gaaacgtggtcgtattggtttcttgccaaagatcaagcaaagtatcaagaaagagaaaga
aggagaggaaaaaggaaagagaagaggctttcctaatattctgggtccaccaaggagacc
gagtcgacatgatagcagtgcaattggcagagccatggaaatgcagaagcctcgccatcc
gaagcacttacctacagcgtcttctgttagcccagagccaccagatcctagcaagatgcg
ccagagtgggtcctctagtgatggaacagatgtgccatacccacctgccaacccaatgtc
tcctttggcaatgggtcccttttcttctccagagggaagcaaggacagcgaaacaagttt
gaagcaaactggagaagctccacctgctaatgactgtgtggatggcacaccccgcacacc
taataatacttttgaattcccatctcctttggaaaacttgcaggaggaggagggagaatc
agagagaatggttgacatgggaacgccaaagccttttcgcaagatggacagtgttggttt
cgcagatgtacaaagtgaagatgagctatatgattttgacacagacgtggacccttccaa
ctggcagcagcttgtgacccgagaagtgttgatggggctgaagccctatgaaatcaagcg
ccaagaagtgattaatgaattgttttacaccgagagagctcatgtccgcacactgaaggt
tctgcataatgtcttctaccagcgcgtcacccgggaagggatcctgaactccagtgacaa
acggaaaatcttttcaaatctggaagatattcttgggcttcatgtggcattgaacgatca
gatgaaagctatccgaaaaaggaacgagacttctgttattggccaaattggggaagactt
gctttcctggtttagtggaccagcagaggagaagctgaaacatgcaactgccactttctg
cagtaaccagccctttgctctagaggtcatcaagtcacggcagaagaaggactcccgctt
ccagacttttgtgcaggatgctgagagtaatccactgtgtcgccggttgcagctgaagga
tatcattcccacagagatgcagaggttgactaagtacccccttctgctggataacattgc
taagtacacagaactgcctgaagagaaagagaaagtgaagaaagcagcagatcattgtcg
tcagatccttaaccacgtgaaccaggctgtcaaagagtctgagaacaagcagcatttgga
agattatcagcgtcgtctcgacctgtcctacttgaagcagtctgaggatccaatgatgga
tgagttcaggaacttggatctaacaaagagaaaaatgcttcatgaagggcccctaacttg
gaaggttaatcgtgacaaaactattgatctctatacgttgcttctggaggacattctggt
gctgttgcagaaacaagatgataaactggtactgaagtgtcacagtaaaatcttggcatc
gacagctgacagtaaacacaccttcagtcctatcatcaaattgaacactgttctggttcg
tcaggtggcaacagataacaaagctttcttcgtcatctccatgtcagaaaatggcgctca
tatttatgaactggtggcacagactgtttcagaaaagaatgtatggcaggaccttatagc
tcagatggcggggactgtaaaaatggggagtaccagaagagtgataccattaccacagtc
aggacctggcgaagaagagcgtgaagaagaggaacagcagaagctgaaagagcaacatga
catatctgccagtagtctacaaagtccagataaagatttgggcctcgaatctcccttaat
actaaatgctcagtcttcttcgcccgtcctgtctgaaaagtccaaggtagaaagtcttct
tgtgtcagagagacagtttgataaagtgcagcaggcagacctgacgcttaaagattcttc
tgtgtgctatgaacgcccaaccaccagtttaccttcagtatcagaagggcagtgggcatt
ggatgcattaaggaacttgggcttgctgaaacaattgttggtacagcagcttggcttttc
tgagaaggggaccgttgaagaccggcaacgctttcccaggtgtaggaccgtttctcaaga
agcccaaacggagagtggaaatgagcctgggctacagcactctgacaacaacaaatttca
ccggcctggaacagacagaatgcttcccagaaccggaactagtgagtctacagctagtta
tggcctccggacttcagctgaattgccagcttcaggggatgccgtgcagctgatagtgag
agaccccagatcaagtagtaacttagcaatagaccacatgagtatgaacctggagatctc
agccacagagctggaaggggtgggtgctgatgaaagcggggagcatttttttgatgctcg
agaagctcacagtgatgaaaatccatctgaaagtgaactaatggaaaggaaggaggaaga
ggatgtgcaaatacggatctcaggaaattatttgatccttgatggatatggaacagtgca
ggagagctccacagatgaggaggtatcatctctagttctccagtgcactgcaggtggccg
cacttctttggactctgcacagcagcagccactttccccacgggacactcagtcagatgg
aggaaactccccgtttgctgaggagatgatggcctcgcgctggggaggggtggaagagtc
ctgctcatttgtagcaagccctcacttctctatagagtcacgtgtgcagatgatgcagta
tattcagaagatagaggatgaccttgaaaagttaaaggaggttgaggaagactacaccat
tctccgacgccaagggctggctggatcagcctccacaggagagcactcagacaaaagcta
g
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