Cariama cristata (Red-legged seriema): 104157410
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Entry
104157410 CDS
T08341
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104157410 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccri03036
]
104157410 (CHD8)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104157410 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Chromo_MIT1
SWI2_SNF2
DUF2683
Motif
Other DBs
NCBI-GeneID:
104157410
NCBI-ProteinID:
XP_009693029
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
GESKRITLVLQQPPGGNAPPGQRHVVLGSLPGKIVLQGNQLAALGAQTKGSPGQPAKVVT
IQLQVQQPPAGQSGAPQKIQVLQQPAGSGQPAPVAVSSVPQVVGGVGQRLTVPLKVVLQP
QAGSSQGGSPGLSVVKVLSSTEVAALTGPGSRGASEESRKLEHQKKQEKANRIVAEAIAR
ARARGEQNIPRVLNEDELPSVRPEEEGERKRRRKGTGERGGAKEERPRKGKGQGGSGKSK
GRSKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPREEEETSVQKRRSNRQVKRKKYTED
LDIKITDDEEDEELDVTGPVRPEQPPVPQPPVLEPEPEGETLPSMQFFVENPSEEDAAIV
DKVLSMRVVKKELPSGQLTESEEFFVKYKNYSYLHCEWATIDQLEKDKRIHQKLKRFKTK
MTQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELK
EDVDEGKIMEFKRIQARHPELKRLPRPQAGSWKKLELSHEYKNHNQLREYQLEGVNWLLF
NWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPLSTITNWEREFNTWTEM
NSIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRC
VIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAE
FLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI
LEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILAEFRESCHHHVPHDF
HLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRV
RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC
HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGNITGIQQFSKKEI
EDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENR
TDIALDDPNFWQKWAKKADLDLDLLNSKNNLVIDTPRVRKQTRHFSTLRDDDLVEFSDLE
SEDEEKPRSRRHDRHHHALHHAYGRTDCFRVEKHLLVYGWGRWREILSHGRFKRRLSERD
VETICRAILVYCLLHYRGDENIKGFIWDLISPTENGKAKELQNHSGLSIPVPRGRKGKKI
KSQSTFDVHKAEWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEK
VLAGAMANEIDIWFPLVEQLEVPTAWWDAEADKSLLIGVFKH
NT seq
4087 nt
NT seq
+upstream
nt +downstream
nt
ggtgaatccaaacgcatcactttagttctccaacaaccgccgggcggtaacgcaccccct
ggtcaacgccacgtggtattgggtagtttaccgggtaaaatcgttttacaaggcaaccaa
ttggctgctcttggtgctcaaaccaaagggtcaccgggtcaaccggccaaggtggtcacc
atccaacttcaagttcagcaacctcccgccggccaatcgggagctcctcagaagatccaa
gtcctccaacaacccgccggcagtggacaaccggcaccagtagcagtttcttccgtgccg
caggtggtggggggcgttgggcaacggttgacggtgccgttgaaggtggttttgcaaccg
caggccggctcatctcagggaggttctcctggtttatcggtggtgaaggtgttgagcagc
accgaagtggcggctttgaccggtcctggttcacgaggcgcctcagaagaaagccggaaa
ttggaacaccaaaagaaacaagaaaaagccaaccggatcgtagctgaagccattgcccgt
gcccgcgccagaggcgagcagaacattccccgtgtcctcaacgaggacgagctaccgagc
gtccgccccgaagaggaaggtgaacgcaaacgccgccggaaaggaactggtgagcgtggt
ggagccaaagaggagagacctcggaagggtaaaggtcaaggtggttccggcaagagtaaa
ggacggagcaaaccgagcaccatcacgccagtggtggggaagaaacggaaacgcaatgct
tcctccgacaactcggatgctgaagtgatgccggcacagtcaccacgggaggaagaagaa
accagcgtgcagaagcgacgatcgaatcggcaagtcaaacggaaaaagtacactgaagat
ttggacatcaaaattaccgatgatgaggaagatgaagagttggatgtgacggggccggtt
cgacctgaacaacctccggttccgcagccccccgtgctggagccggagccggaaggcgag
acgttgccctccatgcaattttttgtggaaaaccccagcgaggaagacgcggccattgtg
gacaaggtcctttccatgagggtggtgaagaaagagcttccgtcggggcagttaacagaa
tcagaagagtttttcgtcaaatacaagaactactcctacctccactgtgagtgggcgacc
attgaccaattagagaaggacaagaggatccaccagaaactgaaacgtttcaaaaccaag
atgactcagatgcgacatttttttcacgaggatgaagaacccttcaaccccgactacgtg
gaggttgatcgcatcttggatgaatcccacagcatcgataaagacaacggggagccggtg
atctattatttggtgaaatggtgttccctaccctacgaggacagcacttgggaactcaaa
gaggacgtagacgaaggaaaaatcatggaattcaaacgtatccaagcccgacacccggaa
ctcaaacgcttgcctcgtcctcaagctggttcgtggaagaaattggagctgtcgcacgag
tacaaaaaccacaaccaacttcgcgaatatcaactggaaggggtcaactggttgctcttc
aactggtacaacaggcagaactgcatcttggccgatgaaatgggtttgggcaagaccatc
caatcaatcgctttcttacaagaagtttacaacgtggggattcgcggtcctttcttggtc
attgcgccgctttccaccatcaccaattgggaacgagaatttaatacttggacggaaatg
aacagcatcgtttaccacggcagtttggcgtcgcgacagatgatccaacagtacgagatg
tactgcaaagactcgcggggtcgtctcatccctggggcgtataaatttgatgccctcatc
accacgtttgaaatgatcctctccgattgtcccgagttacgagaaatcgaatggcgttgc
gtcatcatcgatgaagcgcaccgtctcaaaaaccgcaactgcaaattactcgacagcctc
aagcacatggatctggaacacaaagtcctgttgacgggcacccctctccaaaacacggtg
gaagagcttttcagcctcttgcacttcctggaaccttcccagttcccttctgaagccgaa
tttctcaaggactttggagacctcaagacggaagagcaggtgcagaagctccaggccatc
ttgaaacccatgatgctccgtcgactgaaggaggatgtagagaagaacctggcgcccaag
caagagaccatcattgaggtggagttgaccaacatccagaagaaatattaccgggccatc
ttggagaagaacttctccttcctctccaaaggtgccggtcacaccaacatgcccaaccta
ctcaacaccatgatggagctacgcaagtgttgcaaccatccctacctcatcaacggtgcg
gaggagaagattttggcagaatttcgggaatcttgccaccaccacgtcccccatgacttc
catctccaggccatggtccgctcggccggcaaattggtgctcatcgacaaattattgccc
aagctaaaagctggcggacacaaggtcctcatcttctcccagatggtgcggtgcctcgac
atcctggaggattacctcatccagaagaggtacctctacgagcgaatcgatggacgggta
cgaggcaatctccgacaagcggccatcgatcggtttagcaagcccgactcggatcgtttc
gttttccttctctgcacgcgggcaggcggtttgggcatcaacctcaccgccgccgacacc
tgcatcatctttgattccgattggaatcctcaaaacgacctccaggctcaagcacggtgt
caccggattgggcaaagtaaggcggtgaaggtttatcgcctcatcacgcgcaattcgtac
gagcgggagatgttcgataaggccagcctcaagttggggttggacaaagccgttctgcag
tccatgagcggtcgcgagggcaacatcacagggatccaacagttctccaagaaggagatc
gaggaccttctacgcaagggggcctatgcggccatcatggaagaggatgatgaaggttct
aagttctgcgaggaggacatagatcagattctcttgcgtcggaccaccaccatcaccatt
gagagcgaggggaagggttccaccttcgccaaggcgagcttcgtggcttccgaaaaccgg
accgatatcgctttggatgatcccaatttttggcagaagtgggccaagaaagccgacctt
gacctggatttattgaacagcaagaacaacctggtgattgacactccccgggtgcgtaag
cagacgcgacacttcagcacgcttcgtgacgatgatttggtggagttctcagacctggag
agcgaagatgaggagaaaccacggtctcgtcgtcacgacaggcaccatcacgccttgcat
catgcctatggtcgcactgactgcttccgcgtggagaaacatctcctggtctacggttgg
ggccgatggcgggagatcctgtcccacggtcgattcaaacgccgtctttcggaacgagac
gtggagaccatctgtcgagccatcttggtctactgtcttctccactaccgaggtgatgag
aacatcaaaggtttcatttgggacctcatcagccccactgaaaatggcaaagccaaggag
ctccaaaaccattcgggtctttccatcccggttcctcgtggtcggaaggggaagaagatc
aagtcccaaagtacctttgatgtccataaagccgagtggatccgtaaatacaaccctgac
accctcttccaagatgagagctacaagaaacatctcaaacatcaatgcaacaaggttctt
ttgagggtacggatgctctactacctgcggcaggaggtgatcggggaccaagcggagaag
gtgttggcgggagcgatggccaacgagatcgacatctggtttccactggtggagcagctg
gaggtcccgacggcgtggtgggacgctgaagccgacaaatccctcctcattggggtcttc
aaacacg
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