Cariama cristata (Red-legged seriema): 104157441
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Entry
104157441 CDS
T08341
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104157441 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccri04091
]
104157441 (FREM1)
Lectins [BR:
ccri04091
]
C-Type lectins
Lecticans
104157441 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104157441
NCBI-ProteinID:
XP_009693065
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MACLKSEETLGRASSRNICQGSYFASLSPTLPLFDAEGKLTFGESVVVKLDCAKKEKTSF
VGTILTGGKELASAHNMKPFEKSWLLLLLPVVLRVVCSSFISVNLGVKVMKGQSVFLSEE
DLKFSIPREKDVCKVEVVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDAVM
LRLYRFTETETFVETFTLHVQLLEPDCNIIKMRSRALEVPEYYGLSRAIDKNVLTFDYDR
KINLDCTISIASSETHLPAYGQLITREMQQEQLRGDRPQSFFPGPSMILGQQCRNGSCML
GRGVVHNKKMSCEEFLRMGIRYQHLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQ
IKGAVPNQIPKAALKAKFILEVDQFILTPITTTTIDAEDNETPKSLLIFNITKPPPWGFI
THLSDHTKPVGSFTWKDLNDMLIAYQPPNNSHTERRNYEVEFNVHDFYFERSLPITVHLS
IRTTDTNAPRVSWNTGLNLLEGQSRPITWENFQIVDNDDIQNVRLVTVDGLQHGQLTMRG
GKGFIFTVSDIQAGVVHYHHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLI
SNVVIEVHEGQTILIQGSMLHASDMDSSDDYILFNITRPPQAGEILKKPGPNLIGYSVSS
FLQRDLFNGIIYYHHLGGEVFEDSLEFVLCDSHDPPNLSVPQVMMVHIIPVDDQLPREAP
GVTRHLVVKETEIAYLTKKHLHFIDVEEQDRELTYTITTSPFFSCTHSHSDAGKLFMVDA
IPKLVKDPAALALRSFTQHAVNYMKVAYMPPLQDIGSEAQQVQFIFSVSNQHGGTLYGIC
FNITILPVDNQAPEIFTSHLRVEEGGLSPVTEGHILISDVDTKREHLVLLLQRQPQHGAV
ELDGVPMDEGDRLSCEDLHALAVRYRHDGSETLTDDVLFAASDGIHFVEFILQVKVLPVN
DEPPVMRTGLVPVLHCVEGEEVVLSSEYIYATDADSDDMKLMFTLARQPYHGVLRKAGIA
VDRFSQADVISGLVTYKHTSGEIGLTPSIEILTFIVSDGEASLDVKHCCYDGPLPPPVPL
HNPFPVYDLNITVLPVDNQPPSIATGARFVVEEGSSAALTTNHLFATDPDTTADDLEFVL
VSPPQFGYIENILPSPGFEKSNIGISIASFQLKHLKALNINYVQARHMQMEPTADHFVLY
VTDGLHRSAETPFFVLINPTNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDHLV
FGIVQRPWYGFLINGVHGNDILHYKQLINHDHHSHGLLVDDFSMELLKNGMKLMYMHDNS
ENLTDSFKIQLSDGKHKILRTISVKVIPVDDETPVLSKKDDIEVNMGETRIISSAVLSAE
DKDTPRERIYYLFERIPENGQLQLKVGQGWMTLQTGMKCTQEELDMNLVRYVHTGAIGSK
NQDSFTFYLWDGYNRSPAVDFYINIKDMEKEDIAVFVEPLRVPKGDRGYITTDVLLALDG
TDKPEELLYVITSPPQYGQIEYVSYPGTSITSFSQMDVARQIVCYVHNTKAVVLEDTFRF
IISNGLRTKHGTFMIFLEAVDKALPTLSRNAGLRLVEGAMALLSPDVLQLSDPDTDKENL
TFLLIQLPQYGQLYYQGAVLLQYNFTQQDVDNRDVAYKHRGGDSQIDRFTFVATDRTNQG
FIVNGRVLSEPVAFNIQVDHLDKMAPKIINLHCFSDVELLKNGNYGIYITARSLKASDPN
TEDDKIIFKILRGPHYGYLENITTGGFIQEGFSQKDVNSKIILYVINPSREVNSDNLEFE
VTDASGNSAVPQRLELRWSRIEMQQTEYEVCESVGVVSLKITRAGHSAESAFIAVKVNEI
SATLGKDFTVTASKLVQFDPGMSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTK
AVVKILDSKGGQCSYSHSSGQSKHNFWDRGTLFPVSSGSSSSSRPGSAPLEGIPLPPSKG
SRKHGEDPWQKHSLGNQSRTRLRVTGNGRIVPPSSVFRNGTDVVFTYHGMVSLKIEDDTS
LVKANKKAQMSVINQAQPQINVVSSRKTEIPQADKAELASEPSSRHQDFYSFPKACTPDL
KGLLHYEESTQKLFQCDGIIWKFWNSQSKEVSTKKCPSGWTHHEGSCYFLVANHKVTWNT
AARACREQYLGSLASVANEQHMQWLWDFSGRKPFWIGLNDQVNPGHWEWNGGEPVTYINW
RRGSYRFPKRGRNCVLVQKRGKWQAADCRKVKRNSYICSRKL
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcctgaagtcagaggagacgttaggcagagcatcttctcgaaacatatgccaa
ggaagttatttcgcttccctcagccctaccctccctttgtttgatgcagaaggaaagctc
acttttggtgaaagcgttgtggttaaattagactgcgcaaagaaagagaagacttctttt
gttgggactattctcactggtggaaaagagctggcatccgctcataacatgaagcccttt
gagaaaagctggttacttctactgctgcctgttgtactaagagttgtatgctcctccttt
attagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttcctgtcagaagag
gacctcaagttttccatccccagagagaaggatgtctgcaaagtagaagttgtgattaat
gagccaataacacagagggttgggaaactaactccacaggtttttgactgtcacttccta
cctaatgaagtcaaatacacccacaatggttgtccgattttagatgaagatgcggtcatg
cttaggttgtacaggtttacagaaactgaaacgtttgtagaaacattcactctccatgta
cagttacttgagccagactgtaacatcatcaaaatgcgctcccgtgccctggaggtccct
gagtactatggtttgtccagggcaattgacaagaacgtcctcacttttgactatgacagg
aagataaatctggattgcaccatttctatagcctcttcggaaacccacctgcctgcttac
ggccagctcatcaccagggaaatgcagcaagagcagcttcgtggagatcggccacagagc
ttctttcctggccctagtatgattctgggtcagcagtgcagaaacgggagctgcatgctg
ggacgaggagttgttcacaacaaaaaaatgagctgtgaagaatttctgaggatggggatt
agataccagcaccttgaccctccctcgcctgacaccgattatattcctgtgaggttggat
ctcacagacagcagaagcaaaactttgcacaagactgagtatgcatggctccctgttcag
atcaaaggtgctgttcccaatcaaatacccaaagctgccctgaaggcaaagttcatcctg
gaagtagatcaatttattttaacccctattacaaccacaaccattgatgctgaagacaat
gaaactccaaagtccctgcttatattcaacattaccaagccacctccgtggggcttcatc
actcatctatccgatcacacaaaacctgttggctccttcacgtggaaagatctcaatgac
atgctcattgcttatcagcctccaaataacagccatacagagaggaggaattatgaggtg
gagtttaacgttcatgacttctactttgaaaggagtttaccgatcactgtgcatctttct
atcagaacaacagatacaaacgctcctcgagtttcatggaatacaggcctcaacctcctg
gaagggcaatcccgaccgatcacttgggaaaacttccaaattgtagacaatgatgacatc
caaaatgttcgcttggtcacagttgatggcttacagcatgggcagctcacaatgagagga
ggaaaaggattcatattcacagtctctgacattcaggctggagttgttcactaccatcat
gatgacagtgactctactaaggactttgttgtatttaggatttttgatggcccccacagt
attcgccataagtttccaatcaatatcctccctaaagatgacagccctccatttcttatc
agcaatgtggtcattgaagttcatgagggacagacgatcctgatccagggctccatgctt
catgcttctgacatggattccagtgatgattacatactattcaatattaccagaccacca
caggctggagaaatcctgaagaaaccaggaccaaacctgatagggtattctgtcagcagt
tttcttcagagggatctatttaatggaataatttactatcatcatttgggaggagaagta
tttgaagattcccttgagtttgtgctgtgtgatagccatgaccctcccaatctctcagtg
ccacaggtgatgatggtgcacattatccctgtggatgatcagctacccagagaagcccca
ggagtgacccgtcacctggttgttaaggagactgagatcgcttacctaactaagaaacat
ctccacttcatagatgtggaagagcaagacagagaactcacatacaccataaccacttcc
ccatttttttcttgcacgcacagccactcagatgctgggaaactgtttatggtggacgcc
atccccaagctggtcaaggatcctgctgctcttgcactgcggtcatttactcagcatgct
gtgaactatatgaaagttgcttacatgcctccactgcaggacattgggtctgaagctcag
caagtccagtttattttttctgtcagcaatcagcatggaggcactttgtatgggatctgc
ttcaatattacaattcttcctgtggacaatcaagctccagagattttcacaagccatttg
agagtggaagagggtggcctgagccctgtcacggagggacacattctgatctctgacgtg
gacacgaaacgggagcatctcgtcctcctcctgcagagacagcctcagcacggggcagtg
gagctggatggtgttcccatggatgaaggcgacaggctttcctgtgaggacctgcatgct
ctggcagtcagatatcggcatgatggctctgagactctcactgatgatgtcctctttgca
gcctcagatggcatccactttgtagagttcatcctgcaggtcaaggtgttgcctgtgaat
gatgagccacctgttatgcgaactggccttgttcctgtgctccactgtgtggagggtgaa
gaagtggtcctctcctcggagtacatttatgccacagatgcagacagtgatgacatgaaa
ctgatgtttacgctggctcgccagccctaccatggggtactgaggaaagctggtattgct
gtggatcgtttctcccaagctgatgtcatctctggtttagtcacatacaagcacactagt
ggggagattggcctgactccttccattgagatcttaaccttcattgtctctgatggtgag
gctagcctagatgtgaaacactgctgctatgatggacctcttcctcctccagttccgctt
cacaatccatttccagtatatgaccttaacatcactgtacttccagtggacaaccagcct
ccatcaattgcaactggtgcaaggtttgtggtggaggaggggtcctcagcagcccttact
accaaccatttgtttgccactgaccccgacaccactgcagatgatttagagtttgtcttg
gtttctcctccccagtttggttacattgaaaatatactgccttcccctgggtttgagaaa
agcaacattggtataagtatagcttcgtttcagctgaagcacctgaaagccctgaacata
aactatgtacaagccaggcacatgcaaatggagccaacagcagaccactttgtactttat
gtcactgatgggctgcatcgttcagcagagactccattttttgtgctgatcaacccaacc
aatgatgaagtcccagaattcatagcaaggaatattaccgttcaagagggggagatgaaa
gagctggatctctctgttatcaatgcggttgatctggatgtgccccaagaccatttggta
tttgggattgtgcagaggccctggtatgggttcctaattaatggagttcatggcaatgat
attctacactataaacagttaattaaccacgaccaccacagccatgggttgcttgttgat
gacttttccatggagctgctgaagaacggaatgaagttgatgtacatgcatgacaattcg
gaaaacctcactgacagctttaaaatccagctatcagacgggaaacataaaatcctcaga
accatttcagtaaaggtcattccagttgatgatgagacaccagtgctgagcaagaaggat
gatatagaggtgaacatgggtgaaactcgaatcatttctagcgctgttctgtcagcggaa
gataaagatacccccagggagagaatttactacttatttgaaagaattccagaaaacggt
cagcttcagctcaaggtaggccaaggctggatgactctccaaactggaatgaagtgcact
caggaagaactggatatgaaccttgtgagatatgtccatactggagctatagggtccaag
aatcaagacagcttcacattttatctgtgggatgggtacaacagatccccagctgtggac
ttctacataaatatcaaggacatggaaaaggaagacatcgctgttttcgtagaacctctt
agagtgccaaaaggggatcggggctacattacaactgatgtcctccttgcactggatggt
actgacaagccagaggagctcctgtatgtgataacttccccaccccagtatggacaaata
gagtacgtcagctatcctggcacctccattacgagcttcagtcaaatggatgtagcaaga
cagatagtctgctatgttcacaacacaaaggcagttgttcttgaagatacattcagattc
atcatcagcaatggactgaggactaagcatgggacgttcatgatcttcttggaggcagtc
gacaaagctttgcccacactatctaggaatgcgggattaagattagtggaaggtgctatg
gcactcctttctcctgatgttctacagctttcagacccagacactgacaaagaaaacctt
accttcctcttgattcagctcccccaatatggtcagctctattatcaaggggctgtgcta
ctgcagtacaatttcacacagcaagatgtggacaacagggatgttgcatacaagcaccga
ggtggggattcccagattgacagatttacatttgtggcgacagataggactaatcaaggc
ttcatcgtgaatgggagagtgctgagcgagccagtggcattcaacattcaggtggatcat
ttggacaaaatggcaccaaaaattattaatctccattgcttttctgatgtggaactgctg
aagaatggcaattatggaatctatattactgccagatccctgaaggcatctgacccgaat
acagaagatgacaaaataatttttaagattttacgaggtcctcattatggctacctggaa
aatataacaacaggtggatttattcaggaagggtttagccaaaaagatgtaaacagcaaa
atcatactttatgtcatcaatccatcacgggaagtgaattcagacaacttggagtttgaa
gtcacagatgccagtggaaactccgcggtgccccaaaggctggagctacggtggtcccgg
attgaaatgcaacagactgaatatgaagtgtgtgagagcgtgggagtggtgtctctgaaa
atcaccagggcaggacactctgcagagtctgcctttatcgctgtgaaggtcaatgaaata
tctgctacgctgggaaaggacttcacagtgactgcctcaaagcttgttcagtttgatcca
ggaatgtcaacaaagacatggaatatagcaattacctatgacgggttagaggaagatgat
gaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggcacccgcacaaaa
gctgtagtgaaaattttggactcaaaaggaggtcagtgcagctattcccattcttctggc
caaagcaagcacaacttctgggacagaggcacgctgtttccagtttcctcaggctcctca
tcatcttccaggcctggcagtgctcccttggaagggatcccactgcctccttccaaaggg
tcgagaaagcatggagaggacccatggcagaaacacagcttagggaatcagtcaaggacc
aggctgagagtgactggaaatggcagaatagttcctccttcatctgtatttagaaatgga
actgatgtggttttcacatatcacgggatggtatcactcaaaatagaggatgacacttca
ttagttaaagcaaacaagaaagctcaaatgtcagtaattaaccaagcacaaccacagata
aatgtcgtctcatctaggaagacagaaatcccacaagctgataaggcagaactggcatct
gaacctagctcaagacatcaggacttttactcttttccgaaggcctgtacaccagattta
aagggactcctacattatgaagaaagcactcaaaagttatttcagtgtgatgggataata
tggaaattctggaattcccaaagcaaggaggtaagcacgaagaaatgtccctccggatgg
actcatcatgagggcagctgctacttcctggtagcgaatcacaaggtcacctggaacact
gctgctcgggcttgcagagaacaatacctggggagtctagcaagcgtggctaatgaacaa
cacatgcagtggctgtgggacttcagtgggaggaagcccttttggataggcttgaatgac
caagtcaatcctggacactgggagtggaatggaggagaacctgtaacctacataaactgg
agaagaggctcctaccgttttccaaagagaggaagaaattgtgtattggtgcagaagcga
ggaaaatggcaagcagctgactgcaggaaagtcaaacggaacagctatatatgttcaaga
aagctgtaa
DBGET
integrated database retrieval system
