Cariama cristata (Red-legged seriema): 104157704
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Entry
104157704 CDS
T08341
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104157704 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104157704 (NUP54)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104157704 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104157704
NCBI-ProteinID:
XP_009693442
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MPVLSVVMEKYFSFSSLXPTFYLELMLPCSFSASRLSGFGGLETTNSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAGPAFSFSAPTNTGTSG
LFGATQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPEA
NQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFK
AVGYSLMPNNKDEDGFVVLVFNRKEIDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMP
DDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVK
QLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDII
SEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQL
DTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGL
SHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttgtctgtggtgatggaaaaatattttagcttttcttccctgnagcctacc
ttttacttagaactaatgttaccttgctctttttctgcttcccgcttgtcaggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaactttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagtgcaggtgcgtttggaggatttgggacaact
accaccactgcgggaccagcatttagtttttctgctcccaccaatacaggcaccagtgga
ctctttggtgctacccagaacaagggctttggatttggtactagttttggcacaggaact
ggaactggcttgggtagtggattgggaactgggctaggctttggaggcttcggtacccag
cagcaacagaccacattaggaagcggcttgttcagccagcctgctcagacacctgaggcg
aaccagctgatcaatacagccagtgccctctcggctccaacgctcttgggagatgagaga
gatgctattttggcaaaatggaaccagcttcaggccttctggggaacaggcaaagggtac
ttcaacaataacatcgctccagtggagtttacgcaggaaaaccccttttgcaggtttaag
gctgtgggttacagtttaatgcccaacaacaaagatgaagatggctttgtggtcttggtc
tttaacagaaaagaaatagatattcgaagtcagcagcagcagcttgtagaatcactacac
aaaattctgggaggaaaccagaccctcactgtcaacgtagaaggtgttaaaacaatgcca
gatgaccagacagaagtgatcatttacgttgttgagcgctcacccaacggcacttcgagg
agagttcccgcaacgaccctctatgcccactttgaacaagccaacataaaatcgtccctg
cagcagctgggtgtcagcctctccatggccagaacagagctttccccggcacaagtcaaa
cagctcctgcaaaaccctcctgccggtgttgatcctattatatgggaacaagccaaagtt
gataatcctgatcctgacaagcttattcctgtgccaatggtgggtttcaaggaactgttg
agaagattgaaggtccaagatcagatgaccaaacagcatcaaactcgattagatataata
tcagaagatatcagtgagctgcagaaaaaccaaacgacaactatggcaaaaattgcacag
tacaaaaggaaactaatggccctttctcacagaacgttacaggtgttaataaagcaggag
atccaaaggaaaagtggttacgccattcaagcagacgaagagcagcttcgtgtacagtta
gatacaattcagtgtgaacttaacgcacctacacagttcaagggcagactgaatgagctc
atgtcccaaatcaggatgcaaaaccactttggagcagtgcgggctgaagagcgctattac
atagatgcagacctcttaagggaaatcaagcaacatctgaagcagcaacaagaaggcctg
agtcaccttattagcattataaaggatgacttggaggacatcaaacttatagaacatggg
ctgaacgagagcattcccatcagaggaggagtcttcagttga
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