Cariama cristata (Red-legged seriema): 104158149
Help
Entry
104158149 CDS
T08341
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104158149 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104158149 (CPSF2)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104158149 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104158149 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104158149
NCBI-ProteinID:
XP_009694023
UniProt:
A0A091MMT6
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCHDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattattaagttgactacgctttcaggggtgcaggaggaatctgccctttgc
tatctgttgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgaggaagcatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtctcgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggtaaa
ggacatggtttgtcaatcacaccattgccagctggccacatgataggaggcacaatttgg
aagattgtcaaggatggagaggaagaaattgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagctactg
actaatgttttggagacattacgaggtgatggaaatgtattaatagccgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacaaaggatgcagga
ttaggagtctactctctagctcttttgaataatgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctgtccttgtgtcatagtctgtctgatctggctcgtgtg
cctagtccaaaagttgttcttgccagtcagcctgacttagagtgtggattttctagagat
cttttcattcaatggtgccaggattccaaaaactctataattttaacttaccgcactaca
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaaa
ctaaagaaagaagcagctaagaagttggaacagtctaaagaggcagatatcgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacatgat
ttgatgatgaagggtgaaggtagccggaaaggaagcttcttcaaacaggcaaagaaatct
tatccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaagattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacgaatggagaagagcctatggaccaggatttatcagatgttcctacc
aaatgtatttctgcaacagaatccatggaaattaaagccagagttacatatattgactat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccaaggcaa
ctgatcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agtgaaactcacatttaccaggtcaggctaaaagattctcttgtaagctcgcttcagttc
tgtaaagccaaggatgctgagttggcttggatagatggtgttctggacatgcgagtttca
aaagtggatactggagttattttggaagagggggagctgagggaagatgaagacttagag
atgcaagtggatatgccatcttcagactctagtgtcattgcacaacagaaagccatgaaa
agcctctttggtgatgatgacaaggagatgtgtgaggagagtgagatcattcctactttg
gaacctctgccacctcatgaggttcttggacatcagtctgtgtttatgaacgagccaaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaatctggtagctgttcgcaggactgaaacagggcgcatcggattg
gaaggctgtctctgtcacgacttctataggataagagaccttttatacgagcaatacgct
attgtctaa
DBGET
integrated database retrieval system
