KEGG   Cariama cristata (Red-legged seriema): 104158227
Entry
104158227         CDS       T08341                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ccri  Cariama cristata (Red-legged seriema)
Pathway
ccri03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104158227 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccri03021]
    104158227 (TAF5)
   03036 Chromosome and associated proteins [BR:ccri03036]
    104158227 (TAF5)
Transcription machinery [BR:ccri03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104158227 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     104158227 (TAF5)
Chromosome and associated proteins [BR:ccri03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104158227 (TAF5)
    STAGA complex
     104158227 (TAF5)
    TFTC complex
     104158227 (TAF5)
    SAGA complex
     104158227 (TAF5)
    SLIK complex
     104158227 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz TFIID_NTD2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 WD_LRWD1 Beta-prop_Nup120_160 Tricorn_2nd PEP5_VPS11_N CDK5RAP3 Beta-prop_ACSF4 RAB3GAP2_N eIF2A VPS8_N VID27
Other DBs
NCBI-GeneID: 104158227
NCBI-ProteinID: XP_009694116
LinkDB
Position
Unknown
AA seq 638 aa
GSVATVASSSPGVAAVATVPPGKVGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLK
NFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVL
SSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIF
DGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKK
KKPKKDSVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSIC
FYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDD
VLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYK
GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYI
ATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGL
MVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLP
ENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq 1917 nt   +upstreamnt  +downstreamnt
ggcagcgtcgccactgttgcgtcttccagtcctggggtggcggcggtcgccaccgtgccg
ccggggaaagttggaggaggtgttgttgtggaagatcagccagatgtgagtgcagtactg
tctgcctacaatcaacagggggaccctacgctgtacgaggaatactacagtggattaaaa
aacttcattgaatgttccctggactgtcatcgagcagaattgtctcagctgttttatcct
ctctttgtgcacatgtatttggaattggtctacaatcaacatgagagtgaagcaaagtct
ttttttgaaagatttcacggggatcaggagtgctattaccaggatgacctgcgtgtatta
tctagcttaaccaaaaaagaacatatgaaaggtaacgagaccatgctggatttccgaaca
agcaagtttgtgctgcgtatttcccgtgactcttaccagctcttgaagaggcatcttcag
gaaaagcagaacaatcagatttggaacattgttcaggaacatctttacattgatatcttt
gatggaatgcctcgcagtaaacaacagatagatgctatggttggaagcttggctggggag
gcaaaacgagaggctaataaagcaaaggttttctttggcttattgaaagaaccagagttt
gatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaaggaaagccaaagaag
aaaaaacctaaaaaagatagcgtagggtcaaaaagtaaaaaacaagaccctaatgctcct
ccccaaaacagaattcctctgcctgaactgaaagactctgacaagctggataaagtaatg
aatatgaaggaagctgcaaggcgtgtgcgtcttggcccagagtgcctgccctccatctgt
ttctacacgttccttaatgcttaccagggtctgactgcagtggatattacagatgactct
agcatgattgtaggaggctttgctgactctactgtcagagtgtggtccgtgactccgaaa
aagctacgtagtgtgaaaacagcagcagacctcagtctcatcgacaaagaatcagacgat
gtcttggagaggatcatggatgagaaaaccgcaagtgagttgaagattttatatggtcac
agtggacctgtctatggcaccagcttcagtcctgataggaactatctgttgtcctgttct
gaggatggcactgtcagattgtggagtctccaaacatttacgtgtttggtgggatacaaa
ggacacaactatccagtatgggatacacaattctctccttatggatattactttgtgtca
gggggacatgacagagtggctcgtctgtgggcaacggatcactaccagcctttacggata
tttgctggccatcttgctgatgtgacgtgtacccgatttcatccaaactccaactatatt
gccacgggctcagcagacaggactatacggctctgggatgttttgaatgggaattgtgta
agaatattcactggacataagggaccaattcattcattggcattttctcctaatggacga
ttcctggctactggagcaacagatggaagagttctgctgtgggatattggacatggcttg
atggttggagaattgaaagggcacactgacactatctacgcgctcagattcagtagagat
ggggagattttagcatcagggtcaatggataacacagttcggctgtgggatgctgtgaag
gcatttgaagatttagaaactgatgactttactacagccactggacatataaacttgcct
gaaaactcacaggacttgttactaggtacatacatgaccaaatcaaccccggttgtacac
ctccattttacacgcagaaacttgctgctggctgcgggagcgtacagttcacagtaa

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