Cariama cristata (Red-legged seriema): 104158576
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Entry
104158576 CDS
T08341
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104158576 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104158576 (DHX8)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104158576 (DHX8)
Spliceosome [BR:
ccri03041
]
Complex C
Other components
Step II factors
104158576 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
PRP38_assoc
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
PhoH
TsaE
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Transformer
Motif
Other DBs
NCBI-GeneID:
104158576
NCBI-ProteinID:
XP_009694566
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MADLAAVEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKETAAKPKSEKEKLKELFPALCRPDNPSIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRSSDHWAKKKRKSRSRSRDRKRRHRSRSRS
RSRTRDKNRGKSRYRSRSRSQSPSRDRKDREKYIEKSNERWRDKHLDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctggcggctgtggaagagcttgcgaagctcgaatacttgtctctagtctcc
aaggtctgcaccgagttagacaaccacctgggcatcaacgacaaggacctggcggagttt
gtgataagtcttgctgagaaaaatactacgtttgacacatttaaagcagttcttctaaag
aatggtgctgagttcactgattcccttattagtaatttgctacgtctcatacagacgatg
cgacctccaccaaaaccatctacaagcaaagagacagctgcaaaacccaaatcagagaag
gaaaagctgaaggaattgtttccagccctttgcaggccagacaatcccagcatcaggaat
atgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagaacttgaagctctg
atgcctagtgcagacaggcaaggcaagcaaaggagcagtgaccactgggcaaagaaaaag
aggaagagccgaagtcgtagcagggataggaaacgaagacacagatctcgctctaggtct
cgttcaaggactcgtgataagaacaggggaaaatccagataccggtcaaggagcagaagt
cagagtcccagtagggaccgtaaggatcgagagaagtacattgagaagagcaatgagaga
tggagagacaagcatctagaccgtccaccacctgaggagccttccattggagacatttac
aatggcaaagtcacaagtataatgcaatttggatgctttgtgcagctggaaggattaagg
aagcgttgggagggcttggtccacatctcagagcttcgaagagaaggacgggttgccaat
gttgctgatgttgtgagcaaaggacaaagggtaaaagtcaaagtgttatcctttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaaccca
aaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgagaaacccagac
agacccagtcacctgtccctggtgaatgccccagaggtggaggatgatagccttgaacgg
aaacgcctcacccgaatttcagacccagagaaatgggaaataaaacagatgattgcagct
aatgtgctttccaaggaagagtttcctgactttgacgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccaccgttc
cttcgaggtcatactaaacagagcatggatatgagtcccatcaaaatagtaaagaatcca
gatggttccttgtcacaggctgcgatgatgcagagtgctttagctaaagaaagacgagaa
cttaaacaagcccagagagaagcagagatggattctatccccatgggactcaacacacac
tgggtggatcctctgcctgatgtggatggaagacaaatagctgcaaatatgcgaggtatt
gggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttacggtaagaagacccagctttccatcattgagcagagagagagtctcccaatcttc
agactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttattgga
gaaacaggatctgggaaaacaacacagataacccaatacctggctgaggcagggtataca
tcaagaggaaagattggatgtactcagcctcgaagagtggctgcaatgtctgttgcgaag
agagtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcgattt
gaagactgcactagccctgaaactgttatcaaatacatgacagatggtatgttattgagg
gagtgcttgatagatcctgatctgacccagtatgccattatcatgctggatgaagcccat
gagaggaccatacatacagatgtgctctttggactcctcaagaagactgtgcagaagcgg
caggatatgaagctgatagtgacgtcagcaacgctagatgctgtgaaattctcccagtat
ttctatgaagcgccgatcttcacaattcctggtagaacatacccagtagaaattctgtac
acaaaagagccagagacagattatttggatgccagtctaattacagtaatgcagatccac
ttaacagagccaccaggtgacattttggtgtttctaactggtcaggaagagattgacact
gcctgtgaaatactctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctaccagtatattcagctttaccgagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggttgtcatcgccactaacattgctgagacatctttgactatt
gatggaatatattatgtagttgatcctggctttgtgaagcagaaagtttataactccaag
actggaattgaccagctggttgttacaccgatttcacaggctcaagcaaagcagcgagca
ggaagggctgggagaacaggaccaggaaaatgctataggttatatacagagcgtgcttat
cgagatgaaatgctaaccaccaatgtgcctgaaatccagagaacaaatctggccagtacg
gtactttccctgaaggctatgggcatcaatgatttgctctcctttgactttatggatgct
cccccaatggaaactctcataactgccatggagcagctgtatactctgggagctctggat
gatgagggactactcactcgactcgggcgccgaatggcagaattccccttggagcctatg
ttgtgtaagatgttaatcatgtctgtacatctgggatgcagtgaggaaatgttgacaata
gtctccatgctgtctgtacagaacgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaaattccatcagacagaaggtgaccacctcactctgctggctgtg
tacaattcttggaagaataataagttttcaaatccctggtgctatgaaaattttatccag
gcccgatccttacgcagggcacaggacatccgcaagcagatgttgggcattatggacagg
cacaagctggatgtggtatcctgtgggaaggcaacagttcgagtccagaaggccatctgt
agtggcttcttccgaaatgcagcaaagaaagatccccaggaaggttatcggaccctcatt
gatcaacaagtagtctatatccacccatctagcgctctcttcaacaggcagccagaatgg
gtggtgtatcatgaactggtgctgaccaccaaggaatatatgcgtgaagtgacaactatt
gaccctcgctggctggtggaatttgcaccagctttcttcaaggtttctgatccgaccaag
ctgagcaaacagaaaaagcagcagcggctggagcccctgtacaatcgctatgaggaaccc
aatgcttggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
