Cariama cristata (Red-legged seriema): 104158879
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Entry
104158879 CDS
T08341
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03013
Nucleocytoplasmic transport
ccri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104158879 (CASC3)
03015 mRNA surveillance pathway
104158879 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104158879 (CASC3)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104158879 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
DUF5324
Motif
Other DBs
NCBI-GeneID:
104158879
NCBI-ProteinID:
XP_009694942
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSSESAAKAEKGDEKPD
SKGAITGERQSGDGQESTEPVENKVGKKVPKHLDDDXNPAYIPRKGLFFEHDLRGQTQEE
EVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRRMRK
PRFGSPPQRDPNWSNERPNKPPRHQGTDSSSAPPRTFTNRSSAGTGRMHPPRNYSRMGGY
KETRPSYRASEANVQHLSRNGEQAKQESNYRAKRAEQTAPRDQSPEVEAAHVHSSPVKEE
VALENQATAADAAQPPPDRPIEKKSYSRARRTRVKAGDAGKLADEVPASEGLTPVPPKPV
QAETSPPPAKSSNWESPVESTLDGLEQEMTQMNLTEQNWTPGQSQFIQPRELRGIPNHMH
VGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQFQGPI
YTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPSPPPPQQLL
APTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQVQPK
PSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcattgaaggagatgccgtactctcggattatgaaagtgcagaagac
tcagaggcagaggaagaggattacagcgaggaagaaagtgccaaagttgaactgaagcag
gatagtaacgattcctctgagtcagcagcaaaagcagagaaaggggatgagaaacctgac
tccaaaggtgctataactggtgagaggcaaagcggggacgggcaggagagcactgaacct
gttgagaacaaagttgggaaaaaagttcccaagcacctggatgacgatngaaacccggct
tacatcccgcgcaaagggctcttctttgagcatgacctccgcgggcagacgcaggaggag
gaggtcaggccaaagggccgtcagcggaagctgtggaaggatgagggccgctgggaacac
gacaaattccgggaggacgagcaggcccccaagaccaggcaggagctgatcgcgctttat
ggctatgacatcaggtcagctcacaaccccgacgacatcaagccgaggaggatgcgcaaa
ccaaggtttgggagtcctcctcagcgagacccaaactggtccaacgagaggcccaataag
cccccaaggcatcaaggtacagacagcagttcagctcccccacgaaccttcaccaacagg
agctctgcaggtacagggaggatgcacccacctaggaactactcgaggatggggggctac
aaagaaacccgtccaagctaccgagcttcagaagcaaacgtccagcatctgtctcgaaac
ggcgagcaagcgaaacaggagagcaactatcgagcgaagcgtgcagagcaaacggcaccg
agagaccagtcacctgaggtggaagcagcacacgtccacagcagccctgtgaaggaggag
gttgctttggaaaaccaagccacagctgctgatgctgcccagccaccgccagacagacca
attgaaaagaagtcttattcccgggcaagaaggaccagagtcaaagctggggatgcgggg
aagctggcagatgaagtgcccgcttcggaagggctgactcctgtgcctccaaaacctgtg
caagctgagacgtcccccccgccagccaagagcagtaactgggagtcaccggtagaatcc
accttggatggactcgagcaagagatgacccaaatgaatctcactgagcagaactggact
ccggggcagtctcagttcatacagccccgggagctgaggggtattcctaaccatatgcac
gtgggaactgggccaccgcctcagtttaacaggatggaggaaatggcagtgcaggggggc
cgcgtgaaacgctactcgtcacagcggcagagaccaccggtgccggagcctgcccctccc
atgcacatcagcatcatggaagggcactactacgacccactacaattccagggaccaatc
tacacccacagtgagaacccggccccgctgccgccccaagggatgatcgtacagccagaa
atgcacctccctcatccaggtttacatccccaccagacgccagcccccatggcaaacccc
ggcctgtaccctccgccagtctccatgcccccaagcccccccccgccgcagcagctgctc
gcaccgacttacttctcccctcctggagtcatgaattttgggaatcctggctacccctac
cccccaggagcgctaccccctccgccccctcctcatctctattccaacacacaggcccag
tcccaggtgtacggaggggtcacgtactacaacactgtccagcagcaagtgcagcccaag
ccttcgccgcctcgaaggacgtcccagcctgtgaccatcaagccaccgcctcctgaggac
agcaaaggtgaaaaatcaaaggagcggagcaacacgtag
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