Cariama cristata (Red-legged seriema): 104159198
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Entry
104159198 CDS
T08341
Symbol
SUPT6H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104159198 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ccri03036
]
104159198 (SUPT6H)
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104159198 (SUPT6H)
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104159198 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104159198
NCBI-ProteinID:
XP_009695343
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVMPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEETEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQPSSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
SEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGXFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcagaggagtctgaggaggagtacaaccaggatggg
gaggttatgcccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagaa
gaggaggagaatctcgatgatcaagatgagcaggggaacctgaaaggattcattaatgat
gatgacgatgaggaagaggaagaggaggaagaagccagtgactctggagactctgaggac
gatgttggccacaaaaagagaaagcgcacttttgacgaccgtctggaagatgatgatttt
gacctcattgaagagaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcga
aaaatgtccgatgatgaggatgacgaggaggaagactatggaaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtt
gaagctcctgttgctccaccagaagaagaggaggaggaggaggaagatgaatctgacatt
gatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggacttt
gactatgatgagtttgagaagtacaatgagtacgatgaggagatggaggaggaatatgag
tatgaggatgaagaaaccgaaggggagacccgtgtacgacccaaaaagactgccaagaag
cgtgttagtcggcgtagcatctttgagatgtacgagcccagtgaactggagagcagtcac
ctaacggaccaggacaacgagatccgcatgacagacatgcccgagaggttccagttgcga
tccatcccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaatgcgtttgcaacacccaccatctccttgcaggaaagttctgactaccttgaccgt
ggacaacccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaa
gctctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gagtatgtggagccagagctgcacatcaatgacctgtggagggtctggcagtgggatgaa
aagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcag
gcctatcagtacgaacaaatctccgctgacccagacaaacccttggctgatggaataagg
gccttggatactactgacatggagaggttgaaggacgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaagaaggt
gaaggggaggatgcagaagatgatgagcagaaaggacctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagtttggt
ctgacacctgagcagtttggggagaatctccgagacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagc
cctgaagctgtgctggaaggagcccgatacatggtggctttgcagatagccagagagcct
ttggtcagacaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcttgaaaatgagcctggcagag
gaggaggcactgctcactatagatatcagcattgacatgaaaggagtggaaggttatggt
agcgaccagacgtactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaagagtggaatcggcagcgtacgatggccattgagcggtccctcaaccagttc
ctctatgtgcagatggctaaagagttgaagaacaagctgttggtagaggccaaggagtat
gtcctcaaggcttgcagccggaaactgtacaactggctaaaagtagcttcataccgtcct
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaagggcattcgg
gtgctaggcattgcgttttcctcagccagggaccaccctgtgttttgcgcccttgttaac
ggagagggtgaggttacagacttcctccgattgccgcatttcacaaagaggaggaatgcc
tggcgtgaggaagagagggaaaagaaggcacaggatattgaaactttgaaaaaattcctc
ctgaacaagaagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctctatc
ggagtggagctggtggacaacgaactggccatcctctacatgaacagcaagaagtctgag
agtgagttccgggattacccacctctgttgcgtcaagctgtctcccttgctcgtcgcatt
caggaccccctcattgagtttgcccaggtctgcagctctgatgaggatattctctgcctg
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggctattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctaggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacacggca
tcactgggtgatagtaccgattcctacatcgaagtcctagatgggtctagggtccatcct
gaaacttatgaatgggcaagaaaaatggcagtggatgccttggaatacgatgagtcggca
gaggatgctaatcccgcgggagctctagaggagatcttagaaaaccctgagcgtctgaaa
gacctggatctcgatgcctttgctgaagaactggaaagacagggctacggtgacaagcat
atcactttatatgacattcgagctgaactaagctgcaggtacaaggacctgagaacccca
taccgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccagagact
ttttatataggtaaaatgatcatctgcaatgtgactgggatagcccacaggcggccgcaa
ggagaaagctacgaccaggcaatacggaacgatgaaactggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagcgaggtttggaaccactttgacagcggatcc
tgcccaggtcaggccattggagtgaagacacgtctggataatggtgtcgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaaacggccagaagaaagggtgaaggtggga
atgaccgttcactgcaggattatgaagattgacattgagaagttcagtgccgacctgacc
tgcaggacctcagaccttatggataagaacaatgagtggaaacttcctaaagacacctac
tatgactttgactctgaggcagcagatcacaaacaggaagaagatctgaaaagaaagcag
cagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacattagcttc
aagcaagccgagaagatgatggagaccatggaccaaggggatgtgattattcggccaagt
agcaagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccaacac
gtggatgtccgagaagagggcaaggagaatgccttcagcctgggctccacgctttggatt
aacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactatcaggactgcaatggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctat
tttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacgccagaaggattccgctaccggggccaggtc
ttccctacggtgaacggtntttttaaggatcattatcaggaccctgttccaggtattacc
cccagcagtagcagtcggaccaggactccagcctccattaatgctactccagctaacatt
aacctggcagacctgacccgtgcagtgaacgctctaccacagaacatgacttcccagatg
ttcagtgccatcgctgctgtgacaggccagggacagaacccaaatgccacccctgcgcag
tgggcatccagtcagtacggctatggaggcagcggaggcggcagcagcgcgtaccacgtc
ttcacgactccagcacagcagccggtggccacccctctgatgacccccagttactcttac
actacccccagccagccgattacaacaccccagtaccagctccaggccaacaccacgcct
cagtccacccagtcccagacacagtcgcagccatcatccagctccaggcagaggcagcag
ccaaagaccaacagtcacgctgcgatcgactgggggaagatggccgagcagtggctccag
gagaaggaggctgaacggaggaaacagaaacagaggttgactcctcgcccgtctcccagc
cccatgattgagagcacgcccatgtccatcgctggggatgccaccccactgctggatgag
atggaccgatag
DBGET
integrated database retrieval system
