Cariama cristata (Red-legged seriema): 104159223
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Entry
104159223 CDS
T08341
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104159223 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104159223 (PRPF8)
Spliceosome [BR:
ccri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104159223 (PRPF8)
Complex C
U5 SnRNP specific factors
104159223 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104159223
NCBI-ProteinID:
XP_009695375
LinkDB
All DBs
Position
Unknown
AA seq
2299 aa
AA seq
DB search
WQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMP
HAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKR
DRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDN
RKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGG
PKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPN
VVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTD
NTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVL
NALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYL
HLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLAD
GLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRV
WLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDM
MPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHY
NRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHW
LESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHE
ALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLF
PPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRL
LRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLH
RASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTE
HPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVS
VYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDES
MQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQ
TRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSG
MSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQ
ALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQV
FDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTT
TQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYG
NWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQI
IWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQL
AKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQAC
LKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKP
DKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEI
SAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVR
AISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDN
PQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTH
AKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHY
ERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLN
FALLQEGEVYSADREDLYA
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
tggcagcagctgcaggccaagcgctatgcagagaagaggaaatttggcttcgtggacgcg
cagaaggaggacatgccccccgagcacgtccgaaagatcatccgtgaccacggtgacatg
accaataggaagttccgtcacgacaaacgtgtctacctgggtgctctgaagtacatgcct
catgctgttctgaagctcttggagaacatgcccatgccctgggagcaaataagagatgtt
ccggtcttgtaccatatcacaggcgccatctcttttgtgaatgagattccttgggtcata
gagccagtgtatattgctcagtgggggtcaatgtggattatgatgaggcgagagaagagg
gataggcgtcacttcaagaggatgagattccccccatttgatgatgaagaaccccctctg
gattatgctgataacatcctggatgtggagcccctggaagccattcagcttgagttggat
ccagaggaggatgcccctgtgctggactggttctatgaccatcagccactgaaagacaac
aggaagtatgtaaacggttcaacataccagcgctggcagttcactctcccgatgatgtcc
acgctgtaccggctggccaatcaactgctcactgaccttgtggatgacaactatttctat
ttgtttgacctgaaagcattctttacctccaaggcgctgaatatggctattcctggaggt
cccaagtttgaacctcttgttagagacatcaatcttcaggatgaagattggaatgaattt
aatgacatcaacaaaattatcatcaggcaaccgatcaggacagagtacaaaattgctttc
ccatacctgtacaataatctaccacaccatgtccacctgacctggtatcatactccaaat
gtcgttttcattaaaacagaagatcctgatctcccagctttttactttgatccactgatc
aaccccatttcacacagacattctgtcaagagtcaggaaccgttgcctgatgatgatgaa
gagtttgagttgccggagtttgtggaacctttcctgaaggatactccactctacacagat
aacacagccaacggcattgccctcctgtgggccccacgacccttcaacttgaggtctggg
aggacccggagagctcttgatatcccactggtcaagaactggtatcgtgagcactgccca
gcaggccagccagtgaaagtgcgagtctcctaccagaagctactgaaatactatgttctg
aatgcgctcaagcacagacctcccaaggcccagaagaagaggtacctgttccgctccttc
aaggctacaaagtttttccagtcgacaaagctggactgggtggaagtaggcctgcaggtg
tgtcgccagggctacaatatgctgaacttgctgatccacagaaagaacctgaactacctt
cacttggattacaacttcaacctgaagcccgtgaagaccctcaccactaaggaaaggaaa
aaatctcgtttcggtaatgctttccatctgtgccgagaggttctaaggctgactaagttg
gtggtggacagccatgtccagtacagacttggaaatgtggatgcgtttcagttggcagac
ggcttgcagtatatctttgcccatgtgggtcagctgacaggaatgtaccgatacaagtac
aaactgatgaggcagattcgtatgtgcaaggacctgaagcatctaatctactataggttc
aacacagggcctgtgggcaaaggtcctggctgcggcttctgggctccaggctggagagtg
tggctgttcttcatgagaggcatcacaccactgctggaacgttggctggggaatctgctg
gccaggcagtttgaaggccgtcactcaaagggtgtagcaaagactgttacaaagcagcgt
gtggagtctcactttgacctggagctgagggcagccgttatgcatgacattctggatatg
atgccagagggaatcaaacagaacaaagccagaaccatcctgcagcatctgagcgaggct
tggcggtgctggaaggccaatatcccctggaaggtgccagggctgccaactcctattgag
aacatgatcctgaggtacgtgaaggcaaaagctgactggtggacaaatacagctcactac
aacagggagcggatccgtcggggtgccactgtagacaaaaccgtctgcaagaagaatctg
ggccggctgaccagactctacttaaaagctgagcaggagcggcaacataattacttgaag
gatgggccttacatcactgcagaagaagcagttgctgtgtacacaaccacagtgcactgg
ctggaaagcaggaggttctcacccattcccttcccaccgttgtcctacaagcatgacacc
aagttgctcatattagccctggaaaggctgaaggaagcttacagtgtgaaatctcgcctg
aatcagtcgcagagagaggagttgggcttgattgaacaggcttatgataatcctcatgaa
gctctgtccagaatcaagcgacaccttttaactcagagagccttcaaggaggtgggtatt
gagttcatggatctctacagccacttagttcctgtttatgatgttgaacccttggagaaa
atcacagatgcttatctggatcagtacttgtggtatgaggctgataagcgaagactcttc
cctccatggatcaaacctgctgacactgaacctcctccactgttggtgtacaagtggtgc
caaggcattaataatctgcaagatgtttgggaaacgagtgaaggtgaatgcaatgtgatg
ctggaatctcggtttgagaagatgtacgagaagattgatctgacgttgctcaacaggctg
ttgcgtcttattgttgatcacaacattgctgactacatgaccgccaagaacaacgtggtg
atcaactacaaggacatgaatcacacaaactcctatgggattattcgtgggctgcagttt
gcttccttcattgtccagtattacgggcttgtgatggacctgctggtgctgggtttgcac
cgtgccagtgaaatggctgggcctccccagatgccaaatgacttcctcagcttccaagac
attgccactgaggtggcccatcccattcgcctcttctgcagatacattgaccgtattcac
atcttcttcaggtttacggcagatgaggcaagagacttgattcagcgatatctgacagag
catccggatcccaacaatgagaacatcgtagggtacaacaacaagaagtgctggccccgg
gatgctcggatgcgcctcatgaaacatgatgtgaacctaggtcgtgctgttttctgggat
atcaagaatcgtttgcctcgatcagtcaccacagtgcagtgggagaatagcttcgtgtcc
gtttacagcaaggataaccccaatttgctgtttaacatgtgtgggtttgagtgccgcatc
ttgcccaagtgccgcaccagctatgaggagttcacccacaaggatggtgtctggaacctg
cagaatgaggtcaccaaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtct
atgcagagatttcacaacagagtcaggcagatcctcatggcgtctggctccacaaccttc
actaagattgtcaataaatggaatacagctctgattggcttgatgacatatttccgagaa
gctgttgtaaatactcaggagttgcttgatttgctggtgaagtgtgagaataaaatccag
actcgaatcaaaattggtctgaattccaaaatgcccagccgttttccgccggtggtgttt
tacacccctaaagagctgggagggctgggcatgctctccatgggccacgttctcatcccg
cagtctgacctgaggtggtccaagcagacagatgttggcatcactcacttccgctcagga
atgagtcatgaggaggaccagctcatcccaaatttgtatcgttacattcagccatgggaa
agtgaattcattgactctcagagagtatgggcagagtatgcccttaagcgacaagaggct
atagcacagaacaggcgtctgacgctagaggatctggaggactcatgggacaggggaatt
cctcgtattaacacccttttccagaaggaccggcataccctagcttatgataaaggatgg
agagtcaggactgacttcaaacagtatcaggtcctgaaacagaacccgttctggtggaca
catcagcgccatgatggcaaactgtggaacctgaacaactatcgcacagatatgatccag
gcacttggtggagtggaagggatcctggagcacactctcttcaagggcacttacttcccc
acatgggagggtctcttctgggagaaggccagtggctttgaggagtccatgaagtggaag
aagctgacgaatgcccagagatcgggtttgaaccaaattccaaacagaagattcaccctg
tggtggtctcctaccattaacagagccaacgtatatgttgggtttcaggtgcagctggat
ttgacaggcatctttatgcatggcaagatccccacgctgaagatttctctcattcagatt
ttccgagctcacttgtggcaaaagatccatgagagcattgtaatggatttgtgtcaggtg
tttgatcaagagctggatgctctggagattgagacagtgcagaaggagaccatccatccc
aggaagtcatacaagatgaattcctcatgtgcagatatccttctctttgcttcctataag
tggaacgtgtcacgtccatcattgcttgcggattccaaagatgtgatggacagcaccacc
actcagaagtactggatagatatccagttgcgctggggagattacgattcccatgatatc
gagcgctatgcaagagccaagttcctggactacactacagacaacatgagtatctatccg
tctcccactggtgtgctcattgccatcgatctggcctataacttgcacagtgcttatggg
aactggttccctgggagcaaacctctgatccagcaggcaatggccaaaattatgaaagca
aatcctgcactgtatgtgttgagagaacgaatccgcaaggggttgcagctgtactcatct
gagcctacagaaccatacctttcctcccagaactacggagagctcttctccaaccagatc
atctggtttgtggatgacaccaatgtgtacagagtgaccattcacaagacttttgaagga
aatttgaccacgaaacccatcaatggagccattttcatcttcaatcccaggactggacag
ctcttcctgaagatcatccatacatctgtgtgggcaggacagaagcgtctaggacagctg
gccaagtggaagactgctgaagaagtggcagccttgattcggtcgcttcctgtggaggag
cagcctaagcagatcatagtgactcggaagggcatgttggacccacttgaggtgcacttg
ctggatttccccaacattgtgatcaaaggctcagagttgcagctgcccttccaggcctgt
ctgaaagtggaaaagtttggtgatctcatcctgaaggctaccgaaccccagatggttcta
ttcaatctctatgatgactggctgaaaaccatctcttcctacacggcattctctcgtctg
attctaattctccgggcactacatgtgaataacgatcgagccaaagttattctgaaacca
gataagacaaccataacggagcctcaccacatctggccaaccctgacagatgaggagtgg
atcaaggtggaggtgcagctgaaggatctcatccttgctgactatggcaagaagaacaat
gtgaacgttgcatccctgacacagtcagagatccgagacattatcctgggcatggagatc
tctgccccctctcagcagagacagcagattgcagaaattgagaaacaaaccaaggagcag
tcacagctgacagccacgcagacccgcactgttaacaaacacggggatgaaatcatcacc
tctacaaccagcaactacgaaacccagaccttctcctccaagactgagtggcgagtcaga
gcaatttctgctgccaacctccacctgcgaacaaaccacatttacgtttcatcagacgat
ataaaggaaacaggctatacgtacattcttcccaaaaatgtgttgaagaaattcatctgc
atctcagacctgcgggcccagattgcgggttacctgtatggagtgagccctcccgataac
ccccaagtgaaggagatccggtgcattgtgatggtgccccagtggggaacacaccagact
gtgcatctcccggggcagctcccgcagcatgagtatctcaaggaaatggaacctctgggg
tggattcacacgcaaccaaacgagtcccctcagctctcgccacaggatgtcaccacccat
gccaaggtcatggctgacaacccctcctgggacggggagaagaccatcatcatcacctgc
agttttacgccaggctcctgcacgctgacggcctacaagctgaccccgagcggctacgag
tggggcaggcagaacacggacaaagggaacaaccccaagggctacctgccatcccattac
gagagggtgcagatgctcctgtcggatcgcttcctcggcttcttcatggtcccagcgcag
gggtcctggaactacaacttcatgggcgttcgccacgaccccaacatgaagtacgagctg
cagctcgccaaccccaaggagttttaccacgaggtccatcgcccttctcacttcctcaac
ttcgccctgctgcaggagggcgaggtctactccgccgaccgggaggacctctacgcctag
DBGET
integrated database retrieval system
