Cariama cristata (Red-legged seriema): 104159575
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Entry
104159575 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-23-like
KO
K06813
cadherin 23
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccri03037
]
104159575
04515 Cell adhesion molecules [BR:
ccri04515
]
104159575
Cilium and associated proteins [BR:
ccri03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104159575
Cell adhesion molecules [BR:
ccri04515
]
Cadherins
Major cadherins
104159575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
104159575
NCBI-ProteinID:
XP_009695818
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MLIFVLPLSHGSIASGYFPSYCVVILGHNNQDVPKVKATTTVYVTVLDENDNAPTFQQQL
YEVTLDEGPATLNATLVTVQALDQDEGPNGTVAYAITEGNILGTFHIDSATGQIRTMKEL
DYEISHGRYTLTITATDQCPIISRRLTSTATVLVNLNDINDNCPTFPRPYEGPFDVTEGQ
PGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENIPFYN
LTIAARDRGVPPLSSTILVGVRVLDINDNDPMLLNLPMNLTLSENAPVSSFVTRVLARDA
DKGPNALLTFDITAGNTENAFYINSTSGIVYVNHPLDRERVAEYRLTITVKDNPENIRNA
RRDFDLLVISIADENDNRPLFTQNSYRAEVMENSPPGTLVTVLNGPILALDGDQGSNAVV
TYQLLEAPLDLFVIDNRTGVVSVKPGGVIDREALLDPHLEFTLVARDVGGLNSTASLAVT
VLDDNDNRPVFQPASVTARLRENSPPGFSILQVTATDADSGLNQQLDYRIEGGGQDRFLI
DATTGVIFAANXXXXXXXXXXXEERDAYRLTVVAVDQGTPALSGTGTVSLFIDDVNDCRP
EFINPIQTVSVPESAAPGPVXDRDLHPRLEYYLLEIVARDDTDALVPEQQGAFTVDFRTG
AVKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTINVLDVNDNTPRFRPFGV
TYFTERILEGATQGTTLISISAVDPDKGANGQITYELLQXGYACLEDQSAGKVVANRTVD
YEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPVFSQPSYQKAVFEDVPLGTVI
LRVKATDADSGRFALIQYSLGDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARDNP
GDVSSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDLDEGDN
GVVTYSIEGPGAEAFKINKDSGLVVSRRRLQSYERFNLTVVATDKGRPPLWGTTMLHIEV
IDINDNRPVFIRPPNGTILHIKEEIPLRSNVYEVYATDKDEGLNGAVLYNLLKTGAGNKD
WEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVACDQGQPAYETMQPLQVALDDIDDNEPV
FLRPPRDSPQYQVLSVPEHSRPGTVVGNVTGAVDADEGSNAIVYYFIAAGNQESNFQLSR
EGKLQVLRDLDREKEPYYSIIVKASSQRNWSPPRGQQAGRAQPWDLSGDLTLQEVRIFLD
DINDQSPQFTKSEYTAGVATDAKVGSELIRVVAVDADVGNNSLVLYNILGIRYIKQHSND
SEEVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLVGHNDTAIVGIYILRDDQRV
KIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRE
TNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAPDDLSALQMAIIVLAVLLF
LAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGANPVWLDPFC
RNMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSAAKPEDDRYLRAAIQEYDN
IAKLGQIMREGPIKGSLLKVVLDDYMRLKKLFAQRMVHKATASQGDRSSVSE
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttttgttcttcccctgagccatggcagcattgcctctgggtattttccatcc
tactgtgttgtcatcctcggtcataacaaccaagatgtccccaaggtcaaggccaccacc
acagtgtacgtcaccgtcctggatgagaacgacaatgctcccactttccagcagcaactg
tatgaggtgacccttgatgaaggtcctgccacactcaatgccaccctcgtcaccgtgcag
gccctggatcaggacgagggacccaacggcacagttgcgtatgccatcactgaaggcaac
atcttgggtaccttccacatcgacagcgccacgggacagatccgcacaatgaaggagctg
gactacgagatcagccacgggcgctacaccttgaccatcactgccaccgaccagtgcccc
atcatctcgcgccggctaacgtcgaccgccacggtgctggtgaacctcaacgacatcaac
gacaactgtcccaccttcccgcggccctacgagggtcccttcgacgttacagaagggcag
cctggcccacgcgtctggactttcctggcccacgacggtgactcgggacccagcgggcaa
gtggagtacagcatcatcgccggggaccccctcggggagtttgtgatctccccggtggaa
ggggagctgcgggtgcggaaggatgcagagctggatcgcgagaacatccccttctataac
ctcaccatcgctgcccgggaccggggggtgccccctctcagctctacgatcttggtgggc
gttcgcgtactggacatcaacgacaatgaccccatgctcctcaacctcccgatgaacctc
accctcagcgagaacgcccctgtctccagctttgtcacccgtgtccttgcccgggatgcc
gacaagggcccaaatgccctcctgaccttcgacataacagcgggcaacacggagaatgcc
ttctacatcaacagcaccagcggcattgtctacgtaaaccacccgctggacagggagcgg
gtggcagagtacaggctgaccatcacggtgaaggacaaccccgagaacatacgcaatgcc
aggcgggattttgacctgctggtcatttccatagcggatgagaatgacaaccgccccctc
ttcacccagaactcctatcgggctgaggtgatggagaactcacccccggggactctggtc
acggtgctcaatggacccatcctagccctggatggtgaccagggcagcaacgccgtggtg
acttaccagcttctggaggcacccctggacctctttgttatcgacaacaggacaggtgtc
gtttcggtgaagcctggcggtgtgatagaccgagaggctttgctggaccctcacctggag
ttcacgctggtggctcgtgatgtagggggtctcaacagcactgccagcctggcggtgact
gtcctggatgacaatgacaaccgccctgtcttccagccggcttccgtcacggcccgtctg
cgggaaaatagccccccaggcttctccatcctccaggtgacggcaacggatgccgacagc
ggcctcaaccagcagctggattaccgaatcgagggcggtggccaggacaggttcctgatc
gacgccaccacgggggtgatcttcgcggccaacnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnngggaggagcgggatgcctatcggctgacggtggtggccgtggaccagggcacgcca
gcgctctcgggcaccggcacagtcagcctcttcattgatgacgtcaacgactgccggccc
gagttcatcaaccccatccagacagtcagcgtccctgagtcggccgcccccggccctgtg
nnggaccgggacctccaccctcgcctggagtactacctgctggagatcgtggcccgtgac
gacacagatgcgctggtgcctgaacagcaaggagcgttcacagtggattttaggacagga
gctgtgaagatcaaaactcccctcaaccgggaactggtggccacctacgaggtcaccatc
tccgtccacgacaacgccagcgaagtcatcgaccgctcggtcagcgtgcccaacgccaag
ctgacaatcaacgtcttggacgtcaatgacaacacgccccgcttccgccccttcggagtc
acctatttcaccgagaggatcctggagggagccacgcagggcaccacactcatctccatc
tcagcggtggacccggacaaaggtgccaatgggcagatcacctacgagctgctacagnaa
ggctatgcctgcctcgaagaccagtcggcagggaaggtcgtggccaacaggacggtggac
tacgaggaggtgcagtggctgaacttcaccgtccgagcttccgacaatggctctcctcgc
agatccgctgagatccccgtgtacctccagatagtggatatcaatgacaacaatcccgtt
ttcagccagccatcctaccagaaagcggtctttgaggacgtgccattgggtacggtcatc
ctgagggtcaaggccacggatgcagattctgggcgttttgctctcatccagtacagccta
ggggatggagagggcaagtttgggataaatcccaacacgggtgacatctacatcctgtca
gccctggaccgggagaagaaggatcactacacactgacagctgtggccagggacaaccct
ggggacgtctccagtaaccgtcgggagaactccgtgcaggtgctgatcacagtcctggac
atcaatgacttcaggccccagttcagcaagagccagttcagcaccagcgtctacgagaac
gagccggcggggacgtcggtgatcaccatgaccgccaccgacctggatgaaggggataac
ggtgtggtgacctacagcatcgagggtcccggagcagaggctttcaagatcaataaagac
tctgggcttgtcgtgtcccggcggcgcttgcagtcctacgagaggttcaacttgacagtg
gtggccacggacaaggggcgtccccctctctggggaaccaccatgctccacatcgaggtc
atcgacatcaatgacaaccgccctgtcttcatccgcccgcccaacggcaccatcctgcac
atcaaggaggagatccccctgcggtccaacgtctacgaggtctatgccacggacaaagat
gagggcctcaacggagcggtgctctacaacctgctgaaaaccggggctgggaacaaagac
tgggagtatttcagcatcgactcggtcagcgggctgatccagacggccatgcggctggac
cgggagaagcaggcagtgtacaacctgatcatcgtggcctgtgaccagggccagccagcc
tacgagaccatgcagcccctccaggtcgcacttgatgacatcgatgacaacgagcccgtc
ttcctcaggccacccagggacagtccccagtaccaggtgctctccgtccccgagcactcg
cggccaggcaccgtggtggggaacgtcaccggggcggtggatgcggatgagggctccaat
gccatcgtctactacttcatagcagctgggaaccaggagagcaacttccagctgagccga
gaggggaagctccaggtcttgcgagacctggaccgggagaaggagccgtactactcgatc
atcgtcaaagcatccagccagaggaactggtcgcctccccggggccagcaggcaggcaga
gcccagccctgggacctcagcggggatctgacccttcaggaggtgcggatcttcctggat
gacatcaatgaccagtccccccagttcaccaagtcagagtacacggcgggggttgccacc
gatgccaaggtgggttcggagctgatcagagtggtcgcagtggatgctgatgtgggcaat
aatagcctggtcctctacaacatcttgggcatccgctacatcaagcagcactccaacgac
tccgaggaggtggccaacatcttcagtatcggaacccttgatgggatcctgcgaaccttc
gacctcttcacggcctacaaccccggctacttcgtggtggacatcatggcttctgacctg
gtgggccacaacgacacggccattgtggggatttacatcctgagggatgaccagcgggtc
aaaatcatcatcaacgagatccccgacaaagtcaggcagttcgaggaggagttcatcagc
ctgctctccaacatcacgggtgccatcgtcaataccgatgacgtgcagttccatgttgac
aagaagggtcgagtgaactttgcacagacagagctgctgatccacgtggtgaacagggag
accaaccgcatcctggacgtggagcgggtgattcagatgatagacgagaacaaggagcag
ctgaggaacctcttcaggaactacaacgtgctggacgtgcagcctgccatcaccgcccgg
gccccggatgacctctcggctctgcagatggcgatcattgtgctggccgtcctgctcttc
ctcgctgccatgctcttcatcctcatgaactggtactatcggacagtgcacaaaaggaag
ttgaaggccatcgtggctggctccactgggaacagaggcttcatggacatcatggacatg
ccaaacactaacaagtactccttcgatggggccaacccggtgtggctggaccccttctgc
aggaacatggagctggcagcgcaggcggagcacgaggacgacctgccagagaacctgagt
gagatcaccgacctctggaacagccctgcccgcacccacgggaccttcggcagagagcct
tcagcggccaagcccgaggatgatcgctacctgcgggcagccatccaagagtatgacaac
attgccaagctggggcagattatgcgggagggacccatcaagggctctctcttgaaggtg
gtcctggatgattacatgcgcttgaaaaaactctttgcccagcggatggtgcataaggcc
accgccagtcagggggaccgctcctcggtctcggag
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integrated database retrieval system
