KEGG   Cariama cristata (Red-legged seriema): 104159786
Entry
104159786         CDS       T08341                                 
Name
(RefSeq) DNA-binding protein SMUBP-2-like
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
ccri  Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccri03009]
    104159786
   03012 Translation factors [BR:ccri03012]
    104159786
Enzymes [BR:ccri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     104159786
    5.6.2.5  RNA 5'-3' helicase
     104159786
Ribosome biogenesis [BR:ccri03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   104159786
Translation factors [BR:ccri03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    104159786
SSDB
Motif
Pfam: AAA_11 SMUBP-2_HCS1_1B AAA_12 AAA_30 AAA_19 ResIII DEAD Viral_helicase1 SLFN-g3_helicase nSTAND3 Helicase_RecD UvrD-helicase AAA_22 AAA_16 Flavi_DEAD AAA_25 IstB_IS21 AAA DnaB_C T2SSE DAP3 ABC_tran NTPase_1 VWA_2 PhoH cobW Herpes_ori_bp NPHP3_N AAA_18 AAA_33
Other DBs
NCBI-GeneID: 104159786
NCBI-ProteinID: XP_009696084
LinkDB
Position
Unknown
AA seq 510 aa
AWQESISLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQPRKYDSDAELPYNSFGPGDIV
GLYDSAGQGDPLSTGIVTRVTSRAVTVAFEESRDGMLSLDQESSYRLLKLANDVTYNRLK
KALNALKQYHSGPXXXXXVLFFSADPSAFGETKPLKLYNDSLDASQREAVSFSLAQRELA
IVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGYKARILRLGHPAR
LLEPIQQHSLDAVLARSDNAQIVADIRKDIDQAFAKTKKTQDKGERSHFLSEIKALRKEL
KEREETAMAAALTHASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPLL
KAQKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIGRYGEKIVKMLTVQYRMHQAIMQ
WASSEMYSGRLTAHPSVAQHLLKDLPGVTSTEETTIPLLLIDTAGCGLFELEVEDEQSKG
NPGTVIHKILLPRIDCLRSSASRGLGRCTS
NT seq 1534 nt   +upstreamnt  +downstreamnt
ggcatggcaggagagcatctccctgaaggaactgcagcgcagaggcgtctgtctgctaaa
actccaagccgccaaccagagaactggcctctacggacgcctgctcgtgacatttcaacc
tagaaaatatgactcagatgccgagctgccctataacagttttgggcctggggacattgt
gggcctttacgattcagctggccagggtgatccactctccactggcattgtaacacgtgt
cacctccagagcagtgactgttgcctttgaggaatctcgagatggcatgctgagcttgga
ccaagaaagctcttaccgcctgctgaaattagccaatgatgtcacctacaacaggctgaa
aaaagctttaaatgcactaaagcagtaccacagtggtccannnnnnnnnnnnnnngtcct
gttcttttctgccgatccgagtgcatttggtgaaacaaagcctctaaagctttacaatga
ctcgctggatgcatcgcagagggaggctgtctccttctcgctggcgcagagggagcttgc
catcgtccatggaccacctggcacagggaagaccacaacactagtagagatcatcttgca
agcagtacagcaaggcctgaaagtcctgtgttgtgccccttccaatgttgctgtggataa
tctggtggaaaggttggctggctacaaagcccgcatcctgcggcttgggcaccctgctcg
cctcctggagcccatccaacagcattccttggacgcagtcttggcccgtagcgacaatgc
ccagatagtggcagatatcaggaaggacatcgatcaggccttcgcaaaaaccaaaaagac
tcaagacaagggagagcggagccattttctcagtgagattaaggcactgagaaaggagct
gaaggaacgagaagaaactgccatggctgcagcccttacccatgccagcgttgtccttgc
tacgaatacaggtgcttcttctgatggcccactgaagctgcttcccgaaaatcactttga
tctcgtggtgatagatgagtgtgctcaggccctggaagccagttgctggatacctctgct
gaaggctcagaagtgcatcctggctggggatcacaaacagcttccccccaccatcatctc
tcacaaggctgctgccaagggcctttcgctcagcttgatggagcgtctcatcgggaggta
tggggagaagattgtgaagatgctgacggtgcagtaccgaatgcaccaggctatcatgca
gtgggcttcctcggagatgtacagcggccggctcactgctcacccatcagtagcccagca
tttgctcaaggacctgccgggcgtcacctctacagaagagaccacaattcccttgttgct
tatagacactgctggctgtggcctgtttgagctggaagtggaagatgaacagtctaaggg
gaatccaggtactgtcattcataaaattttgttgccccgaattgattgtctgaggtcctc
agcctctcgtgggcttggccgctgcaccagctga

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