Cariama cristata (Red-legged seriema): 104159786
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Entry
104159786 CDS
T08341
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccri03009
]
104159786
03012 Translation factors [BR:
ccri03012
]
104159786
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104159786
5.6.2.5 RNA 5'-3' helicase
104159786
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
Other ribosome biogenesis factors
104159786
Translation factors [BR:
ccri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104159786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_12
AAA_30
AAA_19
ResIII
DEAD
Viral_helicase1
SLFN-g3_helicase
nSTAND3
Helicase_RecD
UvrD-helicase
AAA_22
AAA_16
Flavi_DEAD
AAA_25
IstB_IS21
AAA
DnaB_C
T2SSE
DAP3
ABC_tran
NTPase_1
VWA_2
PhoH
cobW
Herpes_ori_bp
NPHP3_N
AAA_18
AAA_33
Motif
Other DBs
NCBI-GeneID:
104159786
NCBI-ProteinID:
XP_009696084
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
AWQESISLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQPRKYDSDAELPYNSFGPGDIV
GLYDSAGQGDPLSTGIVTRVTSRAVTVAFEESRDGMLSLDQESSYRLLKLANDVTYNRLK
KALNALKQYHSGPXXXXXVLFFSADPSAFGETKPLKLYNDSLDASQREAVSFSLAQRELA
IVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGYKARILRLGHPAR
LLEPIQQHSLDAVLARSDNAQIVADIRKDIDQAFAKTKKTQDKGERSHFLSEIKALRKEL
KEREETAMAAALTHASVVLATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPLL
KAQKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIGRYGEKIVKMLTVQYRMHQAIMQ
WASSEMYSGRLTAHPSVAQHLLKDLPGVTSTEETTIPLLLIDTAGCGLFELEVEDEQSKG
NPGTVIHKILLPRIDCLRSSASRGLGRCTS
NT seq
1534 nt
NT seq
+upstream
nt +downstream
nt
ggcatggcaggagagcatctccctgaaggaactgcagcgcagaggcgtctgtctgctaaa
actccaagccgccaaccagagaactggcctctacggacgcctgctcgtgacatttcaacc
tagaaaatatgactcagatgccgagctgccctataacagttttgggcctggggacattgt
gggcctttacgattcagctggccagggtgatccactctccactggcattgtaacacgtgt
cacctccagagcagtgactgttgcctttgaggaatctcgagatggcatgctgagcttgga
ccaagaaagctcttaccgcctgctgaaattagccaatgatgtcacctacaacaggctgaa
aaaagctttaaatgcactaaagcagtaccacagtggtccannnnnnnnnnnnnnngtcct
gttcttttctgccgatccgagtgcatttggtgaaacaaagcctctaaagctttacaatga
ctcgctggatgcatcgcagagggaggctgtctccttctcgctggcgcagagggagcttgc
catcgtccatggaccacctggcacagggaagaccacaacactagtagagatcatcttgca
agcagtacagcaaggcctgaaagtcctgtgttgtgccccttccaatgttgctgtggataa
tctggtggaaaggttggctggctacaaagcccgcatcctgcggcttgggcaccctgctcg
cctcctggagcccatccaacagcattccttggacgcagtcttggcccgtagcgacaatgc
ccagatagtggcagatatcaggaaggacatcgatcaggccttcgcaaaaaccaaaaagac
tcaagacaagggagagcggagccattttctcagtgagattaaggcactgagaaaggagct
gaaggaacgagaagaaactgccatggctgcagcccttacccatgccagcgttgtccttgc
tacgaatacaggtgcttcttctgatggcccactgaagctgcttcccgaaaatcactttga
tctcgtggtgatagatgagtgtgctcaggccctggaagccagttgctggatacctctgct
gaaggctcagaagtgcatcctggctggggatcacaaacagcttccccccaccatcatctc
tcacaaggctgctgccaagggcctttcgctcagcttgatggagcgtctcatcgggaggta
tggggagaagattgtgaagatgctgacggtgcagtaccgaatgcaccaggctatcatgca
gtgggcttcctcggagatgtacagcggccggctcactgctcacccatcagtagcccagca
tttgctcaaggacctgccgggcgtcacctctacagaagagaccacaattcccttgttgct
tatagacactgctggctgtggcctgtttgagctggaagtggaagatgaacagtctaaggg
gaatccaggtactgtcattcataaaattttgttgccccgaattgattgtctgaggtcctc
agcctctcgtgggcttggccgctgcaccagctga
DBGET
integrated database retrieval system