KEGG   Cariama cristata (Red-legged seriema): 104160208
Entry
104160208         CDS       T08341                                 
Symbol
TRIM42
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
ccri  Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccri01009]
    104160208 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccri04121]
    104160208 (TRIM42)
Protein phosphatases and associated proteins [BR:ccri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104160208 (TRIM42)
Ubiquitin system [BR:ccri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104160208 (TRIM42)
SSDB
Motif
Pfam: fn3 Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 104160208
NCBI-ProteinID: XP_009696584
LinkDB
Position
Unknown
AA seq 720 aa
MDENGHPCSIWSCCLNCCYLTCHSRREERCLCWCFSFTSEQNCSCFPCPYEEDKLSQCCH
CSCAEHANCWRCCCSCSNDPDCKCCCCSERIQLLSIMESKYCRSSVDEPHHSRTPETVRV
KFLVVLSKDVMSRFRTRNNAFVITPERNVSSHAFCDKLXPLCKQSFLQPFMLPCHDCSCX
KYITKSKTKVEVIGNFYIIICPVCSKTFFYTNKNQLRENYLTAKLAKKYMHRHGFLRWRF
DHGERPDYCETYRERRVATKRCRTCGNSYYNECLHLNHSENGAQDHIFTKAHQEDHEQWC
CLLYSNPNLSEYCLDDHERICGVCKNSVHNQHKSIPWAVACSRQVTSLFDTIAKFSKVRX
GVDNDLMEVILLKNNFKTYKDTKRKEIRNGFLKLHMVLHEQEKEMMELLENIELKEQKEI
SENIKYTSSQLSYMDGLILYFKEALKEESQAVFLQXAHXLVKEIENAVPFIFQPSPHLKE
DPLRKHQLNFNEIFSVLQGLXPPLSGIKQSESKAEKYPYSFKPEIMVPRHVSSSCKSKQA
TLFQSPSLNSLFDLAVLSTDTVRRPSSTPPHDPTQTNEVCVYQYTACETPRKQRKIQIVN
FSSPEPIDNESVPVPETVVIYQTIVYSRSAKIDWTCPTEDVDFFEAEFYEVAGIGPDNFV
QTKLAGQLSKMXQQNLEIHNLDPNTEYLFKVHVVNASGRGEWSEICKMITSDEYRKNQRQ
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggatgaaaatgggcatccctgttcgatctggtcatgctgcttaaactgctgttacctg
acttgccacagcagaagggaagaacgctgcttgtgttggtgcttctcatttaccagtgag
cagaactgcagctgtttcccatgtccgtatgaagaagacaaactttcccagtgctgccac
tgctcgtgtgcagagcatgcaaactgctggcggtgctgctgctcttgttcaaatgaccca
gactgcaaatgctgctgctgcagtgagagaattcagcttctcagtattatggaaagcaag
tactgcagaagttctgtcgatgaaccacatcactcaagaacaccagaaactgttcgagta
aaatttcttgtggttttgtcaaaagatgtcatgtcaagatttagaactaggaataatgca
tttgtcattacaccagaaaggaatgtctccagccatgctttctgtgacaagcttnngcca
ctgtgtaagcaatcgtttctccagccatttatgctgccatgccatgactgcagttgttag
aagtatataactaaaagcaagaccaaagttgaagtaattggaaacttttatatcatcata
tgcccagtgtgtagcaaaacatttttttacacaaataaaaatcagctgagggagaattac
cttacagcaaaactagccaagaaatatatgcacagacatggctttctgaggtggagattt
gaccatggggagagaccagactactgtgaaacctacagggagagaagagtggcaaccaaa
agatgtagaacatgtggaaatagctattataatgaatgtctgcatttaaatcatagtgag
aatggtgctcaagaccacattttcaccaaagcacatcaagaagatcatgaacagtggtgc
tgcttactgtacagcaacccaaacctctctgaatactgcctggacgaccacgaacggatc
tgtggggtctgcaagaactcagtgcacaatcagcacaagagtattccatgggcagtcgcg
tgttcaagacaggttacttccctctttgatacaattgcaaaatttagcaaagtacgttaa
ggagttgacaatgatctaatggaagttatcctgttaaaaaataatttcaagacctataag
gacaccaaaagaaaggagatcagaaatggattcttaaaattacatatggttcttcatgaa
caagaaaaggagatgatggagttgcttgaaaacattgaacttaaagaacagaaagaaatt
tcagaaaacataaaatatacatccagtcagctatcatatatggatggccttattctttac
tttaaagaggctcttaaggaggaaagtcaagctgtgtttctgcaataagcacactgatta
gtgaaagaaatagaaaatgcagttccattcatttttcaacctagtccgcatctaaaagaa
gatcccttaaggaaacatcaactcaacttcaatgaaattttctctgttttacagggactt
nttccaccccttagtggaataaagcagtcagaaagtaaagcagaaaaatatccctattct
tttaagccagagataatggttccaaggcatgtttcaagttcttgcaaatccaagcaagca
acattgttccaaagcccatctttaaattccttgtttgatttagctgtgctgtctacagac
actgtcagaagaccaagctctacacctccccatgatcctacacagactaatgaagtgtgt
gtataccagtatacagcttgtgaaactccaagaaaacaaagaaaaatacagattgttaac
ttttcaagtccagaacctatagacaacgaatcggttccagtcccagaaactgttgttata
taccagactattgtttactcaaggtctgccaagattgactggacatgtcccacagaagat
gtggacttctttgaggcagagttttatgaagttgctggtattggtcctgataactttgtc
cagacaaaactggctggccagctaagcaaaatgtagcagcagaaccttgagatacataac
ctggatccaaatacagaatatctttttaaagtccatgttgtcaatgcaagtggtcgagga
gaatggagtgagatctgtaagatgatcacttcagatgaatacaggaaaaatcaaaggcag

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