Cariama cristata (Red-legged seriema): 104160466
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Entry
104160466 CDS
T08341
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccri03000
]
104160466 (PRDM1)
Transcription factors [BR:
ccri03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104160466 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
B129_C2H2-zf
zf-met
zf-C2HE
zf-C2H2_FBX41
GAGA
CapR
Motif
Other DBs
NCBI-GeneID:
104160466
NCBI-ProteinID:
XP_009696896
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
ASRYAPAGQEPPGAASRLEPACPGTAGTPLLDGTPSRPQQLSSQGQELLTRKVTGVISKE
YIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPG
YSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTH
VNPKQHSADKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRK
NYSPERCFFPRVVYPIRPHVPEDYLKASLAYGMDRPSYITHSPIQTSTTPSPSGRSSPDQ
SLKSSSPHSSPGVTVSPLAPTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLPPAFLPS
YNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHVLNPST
LPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASS
EHIMQPKPTSVVLAATGSEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFG
QLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFRSTSN
LKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVH
LKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRR
EMEGANLKVSLQRNLGNGLLSSGCNLYESSDMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2345 nt
NT seq
+upstream
nt +downstream
nt
ccgcctcccgctacgctcccgcagggcaggagccccctggggctgccagccgtctggagc
cagcctgccctggcactgctggcacccctctcctggacggtaccccttctcgaccacagc
agctcagctcgcagggccaagaattgctgaccagaaaggtcactggagttataagcaaag
agtacatcccaaaaggaacgcgctttggacccctggtaggagagatctataccagtgata
cagttcccaagaatgcgaacagaaaatacttttggcggatctattcaagtggtgagcttc
accacttcattgatggatttaatgaggacaagagcaactggatgcgttatgtaaaccccg
gctactctgttcaggaacagaacttggctgcttgtcagaatggaatgaacatctacttct
acaccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagactttg
cagagaggctgcactatccctcctccagagagctgacaatgatgaacctcacacaaactc
atgttaatccaaagcagcacagtgctgataaagatgagctctatcagaaaagcatcccaa
agaaggagcacagcgtgaaagaaatcctgaaaatggaatccaatcctccgaaaggaaaag
acttcttccagaccaacatttcaccagttactccagaaaaagacttggatgatttgcgta
agaactatagcccggagaggtgtttcttccctcgagttgtctacccgatccgccctcacg
ttccagaagactatctgaaagcttccttagcgtacgggatggacagacccagctacatta
ctcactcgcccatccagacatctactacaccgagtccttccgggaggagcagcccagacc
aaagtttaaaaagttcaagccctcacagcagtccgggggtcacggtttcgcctctggcac
ctacgtcccaagagcacagagagccatactcttacttgaacggatcgtatggctcggaag
gattggggtcttatcctggatatgcaccccctggccacctcccacctgcctttctgccgt
cctataacccccactaccccaaattcctgttacctccgttcaatatgagctgtaataacc
tgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatgtatc
ctctttacggcaacctgctcagcggaggtagcctttcccaccacgtgttgaaccccagca
cgctccccagttccttgcccagtgaaggaggccgtcgattgctgcagcctgatcatccga
gagacttcctcataccagcacccaacagtgccttctctatcacgggcgctgctgccagca
tgaaggacaagccatgcagccccaccagcgggtcacccacagctggtacagcagccagtt
cagaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcagtgaag
aagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctcccgtacc
cactgaagaagcagaatgggaagatcaagtacgaatgcaacgtctgctccaagacctttg
gccagctctccaacctgaaggtgcacctccgagtacacagcggagagagaccatttaaat
gccagacttgcaataaaggcttcacgcagctggctcacctccagaagcactatctggtac
acacgggagaaaaaccccacgagtgtcaggtttgtcacaagcggttccgcagcaccagca
atctcaaaactcacctgcggctccactccggagagaagccttaccagtgcaagctctgcc
cggccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgggaac
gtccccacaaatgcatccactgccacaagagctacattcacctctgcagcctccaggtcc
acctgaagggcaactgccctgttgcccctgcctctggcctctccatggaggacctgaacc
gaatcaacgaggagatcgagaagttcgacatcagtgacaatgctgacaagttggaagaag
tggaggacaatatcgacttaacatccatcgtggagaaggatatactgaccatgctcagga
gggaaatggaaggagctaatctgaaggtatctctgcagaggaacctgggaaatggacttc
tctcctcaggatgcaacctttacgagtcgtcagatatgtcaattatgaagttgcctcacg
gtcacccactacctctgttacctgtaaaggtcaagcaagaaacagttgaaccaatggacc
cttaa
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