Cariama cristata (Red-legged seriema): 104160808
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Entry
104160808 CDS
T08341
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104160808 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104160808 (PAN3)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104160808 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104160808 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104160808
NCBI-ProteinID:
XP_009697338
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFITDLED
RYNTALPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQ
TPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSP
LHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSAGQVIQKETVGGTTY
FYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQ
IDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRI
HGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHF
NDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDP
TKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSG
IQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRN
DVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTE
AGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAAN
GQL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcagtagctcccccagccttctcaatgacagtgccaagcagtacgcaggc
catgatccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtg
tctcagaggaggaagctggcaaaaccagcatttccttcgtttatcactgacttggaagac
agatacaatacggccttgcccaggaagtatcgactggggatgctggatgagaggatagtt
ccggtgggatcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgt
aaaacaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacag
acaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagt
aatgtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatg
ggaagtcctgctactgctgggctagcaccaggaatgtcactgtcagcaggatcttctcct
cttcattcccccaaaataactcctcatacctctcctgctcctcgaagaagaagtcatact
cctaacccagcaaactatatggtgcctactagtgcctctgcttctgtcgctaatgctgtc
tctcagcctccatctgctggccaggtgatccagaaggaaaccgtgggtggaacaacgtac
ttctatactgatacaactcctgcacctctcacaggaatggtatttccaaactaccacatt
taccatccagctgcacctcatgttgcttacatgcagccaaaagcaaatgcaccttccttc
ttcatggccgatgagctcagacaggaactgatcaacagacacttaataactatggcccag
attgatcaggctgatattcctgcagttcctgcggaagtggacagctaccacagtctcttt
cctttggaaccactgccaccacccaatcggatacagaaaacaagcaactttgggtatatt
acatcatgctataaagctgtaaatagtaaagatgacctgccgtattgccttcggaggata
catggttttcgtcttgttaacacaaaatgcatggtattggttgacatgtggaaaaaaatt
cagcactcaaatatagtaactttgcgtgaagtgtttaccactaaagcatttggagaacat
tctctggtgtttgcgtatgattttcatgctggaggagagactatgatgagcagacacttc
aatgaccctagtgctgatgcctatttcacaaaacgaaaatggggtcagcatgacggacct
ctaccgcggcagcatgctggattgcttccagagtctttgatatgggcatatattgtgcag
ctcagctctgcgttacggaccattcatacagcaggactggcgtgccgagtcatggatcca
acaaagattctagtaacaggcaaaacgaggttacgagttaattgtgttggaatctttgac
gttttgacatttgacaacagtcaaaataatccactggcattaatggctcagtttcagcaa
gcagatctgatctccctggggaaagttgtgttggctttggcttgcaattctttatcagga
attcagagagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgac
ctgaagaatctgattttgtatttgctgaccgatcaaaacaggcttcgcagtgtaaatgat
atcatgcctatgattggtgcacgattctatactcagttggatgctgctcagatgcgaaat
gatgttatagaggaagaccttgcaaaggaggtgcaaaatggaaggttgtttaggcttctg
gcaaaattgggaacaatcaatgagaggccagagtttcagaaggacccaacgtggtcagaa
actggagacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaa
gcgggtactccttggattgacctcagtcacattatctcatgtcttaacaagttagatgct
ggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaact
tacagcgatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaat
ggtcagttgtag
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