Cariama cristata (Red-legged seriema): 104161186
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Entry
104161186 CDS
T08341
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104161186 (PMS1)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104161186 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104161186
NCBI-ProteinID:
XP_009697824
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MKQLSAETIRLLSSSQVITSIVSVVKELIENSLDASATNIDIKLENYGFNKIEVRDNGNG
IKVADVPVMAVKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLITTKTAADDFSTQ
YALDSNGHITSKKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYG
IIKPDLRITLTHDKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEIKLSGFL
PKAGSDSSLTSLSSSERSFVFINNRPVHQKEILKLIRQYYSLVMHKDCTRLYPVFFLNIT
VPASAVDVNLTPDKSQVLLHYKESVLLAVENVLKSLYGPLPATVPGESNKTDVTSEDMFV
HRTEQTDVVVNEMRPSGNDDLHAHTSFLSFSSDVQNCQAGKNTEICLNHQTFCGDNVHSC
LDKKEVSKSDVFPDSSLNLLCEEEQNITDIQSNGVPVDPKSKKADEHLLSSDNIDKIEKN
EEALVPKDLPEISADNWSMGSGFKNRLGDNLEPVKILIPEAGGTISKQNEHNGEHSNDPQ
ISNQSIKKRNVITDKFGHVTAYDLISSRIIRKPKSAIGFFTQECRPKLITDNPKTSMEXX
XXXXXXXXXLKIEEQWKNLNEEEKKK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctatcggcagagactattcgtctcctttccagttctcaggtgattacatca
attgtcagtgtggtgaaggagctgatagaaaattccttggatgccagtgccacaaatatt
gatattaaactggagaattatgggtttaacaaaatagaagtaagagacaatggcaatgga
atcaaggttgctgatgttccagttatggcagttaaacactacacctcaaaaataagctct
tctgaggaccttgaaaggttgacaacatacggtttccgtggggaagctttgggatcaatt
tgctgcatatcagaggttttgatcacaacaaagacggccgctgatgatttcagcactcaa
tatgctttggatagcaatgggcatataacttctaaaaagccttcccatcttgggcaaggt
actacagtaacagtcctaaagttgtttaagaatcttcctgtaagaaagcagttttactca
acaaatagaaaatgtaaggaagagttgaagaaagtccaagatctactgacagcatatggt
atcataaaaccggacctgaggataactttaacacatgataaggcagttatttggcagaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctgtgaagatcctgagataaagctttctggatttctc
ccaaaagctgggtcagacagttctttgacaagcctttcaagttcagaacggagttttgtt
tttataaataatcgtccagttcatcagaaggaaatattgaagttaattcgacagtactac
agtctggtgatgcacaaggactgtactcgtttatatcctgtgttctttttgaatattact
gtacctgcctctgctgtggatgtgaatttaacacctgataaaagtcaagttttactgcat
tataaggaatctgtattacttgctgttgaaaatgtgttgaaatcactgtatgggccacta
cctgctacagtccctggtgaaagtaataaaacagatgttacctcagaagacatgtttgtt
catagaacagaacaaacagatgtggttgttaatgaaatgagaccatctggaaacgatgat
ctacatgctcatacttcattcctttcattcagcagtgatgtgcaaaactgtcaagcaggg
aaaaacacagagatctgcttaaatcatcagacgttttgtggtgataatgtacatagttgc
ctggacaaaaaagaggtttctaagagtgatgtctttccagacagttccttaaatttattg
tgtgaggaagaacagaatataactgatattcaaagtaatggtgttcctgtggaccccaag
tctaaaaaagctgatgagcatcttttgagttctgataatattgacaaaatagaaaaaaat
gaagaagccttagtccctaaagacttacctgagatctctgctgataactggagtatggga
agtggatttaaaaaccgtctaggagacaacctggaacctgttaagattttgattcctgaa
gctggaggaacaattagtaagcaaaatgaacataatggtgaacacagcaatgatccacaa
atctcaaatcaaagcataaagaaaagaaatgtgataactgataaatttggacatgtgaca
gcttatgacttaattagtagtagaataataaggaaaccaaagtctgcaattggatttttc
actcaagaatgtcgtccaaaattgataactgataatccaaagaccagcatggaggnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnngctgaaaattgaagagcagtggaagaatttgaat
gaagaagaaaaaaagaagtaa
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