Cariama cristata (Red-legged seriema): 104161273
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Entry
104161273 CDS
T08341
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccri04040
]
104161273 (TRPA1)
Ion channels [BR:
ccri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104161273 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
104161273
NCBI-ProteinID:
XP_009697938
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MNGLPCNVISDGSACRLRSFIKKNRSGLTKVDELNATPLHHAAEGGQIELMQLIIDDSSC
EVLNVMDSSGNTPLHWATKKNQVESVSLLLSRGANPNILNSNMMAPLHMAVQSLHNEIVK
ILVQHSSTDVNLEGEAGNTPIIVACYKDNPEALTLLIENGGKICKPNKTGCMPIHAAAFS
GAKTCMEILLKKGEELGHSAKTHINFTNNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLK
QNEKCTALHFAATQGATEIVKLMMSSYAGEESIIDAVDGNKETLLHRTALFDHYELAEYL
ISMGANIDSVDIEGRSPLLLATSCASWKIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGG
LQHLNEKFLQMEHIKNLVVDEDNEGCTPLHYACRQGVALSVNNLLSLNVSIYSKSRDKKS
PLHFAASYGRINTCQRLIRDMKDTRLLNEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALF
LCDYKGWTALHHAAFGGYTRTMQIILDTNVKCTDRVDEEGNTALHLAAREGHAKAVRLLL
DYGAKILFNKAVASFFHEAIHNRRKDVVSAVILHKRWEEAVVTFSHYSSANKCPLLEMVE
YLPDSFKLVLDNCIIESSEEKTSRDFYIEYNFRYLQCPLTLNKKLKDGEDIFYEPLTTLN
AMVRHNRMELLSHPVCKEYLLMKWMAYGFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLN
GTEIYEARPLEYENSYFTRVCMCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIY
TTSIIFVSSLFINTPAHLQWECGAIAVYLSWMNFLLYLQRFENYGIYVVMFWEILRTLIR
IAVVFFFLILAFGLSFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYHDAFLDPLLSSELP
YPFLSYTVLIIFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPF
WFLSRVDQESITVYPNRPRYCGFMSVFQYCFGCEDSTTDAQSTDTTLELEVLKQKYRLKD
ISTLLEKQHDLIKLIIQKMEIVSEAEDEDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTN
VPNPSTEKNNSFF
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggctgccctgtaatgtgatatcagatggaagtgcctgtaggctacgaagcttc
attaagaagaatcgttctggacttaccaaagtggatgaattaaatgccaccccactgcat
catgctgcagaaggtggtcaaatagaattaatgcaactgatcatagatgattcttcctgt
gaagtattaaatgtgatggattcttctggaaatacgccactgcactgggccacaaagaaa
aaccaggttgaaagtgttagtttgcttctcagcagaggagccaatccaaacattctcaac
tccaatatgatggcacctttgcatatggccgtacagtccctgcataatgaaattgttaag
attttagtccagcatagcagtacagatgttaatttggaaggtgaagcagggaacacacct
ataattgtagcatgttacaaggataatcctgaagcactgacactcctgattgaaaacgga
gggaaaatatgtaaaccaaacaaaacaggatgtatgcctatccatgcagctgcattttca
ggtgcaaaaacatgtatggaaattcttttaaaaaaaggtgaagaactgggtcactctgct
aaaacccacatcaattttaccaataatggaaagtgcagtccacttcatttggcggttcag
agtggggaccttgaaatgattaaaatgtgcattgaatttggagcccaaattgatctaaaa
cagaatgaaaaatgcacagcacttcattttgctgccactcaaggagcaactgagattgta
aagttaatgatgtcatcctatgctggtgaggaatccattattgatgccgtagatgggaat
aaggagacattgcttcacaggacagcattgtttgatcattatgaactggcagagtatttg
atttcaatgggggctaatattgatagtgttgacatagaaggtcgatcaccgcttctgttg
gccacttcctgtgcatcatggaaaattgtgaatttactgctctcaaaaggagcaaatgta
tcattaaaagatcatcttggtcggaatttcttgcatttgacggtattgcagcctggagga
ttacagcatctgaatgagaaatttctacagatggaacatattaaaaatcttgtagtggat
gaagataatgaaggatgcactccattgcattatgcatgcagacaaggtgtggccctctct
gtaaataatttactcagcctcaacgtttccatctattctaagagcagagacaagaagtca
ccattacactttgctgccagctatggacgtatcaatacatgtcaacgacttataagagat
atgaaagacacaagacttctgaatgaaggtgataagaagggaatgactccccttcatttg
gcagcccagaacggtcatgagaaggtagttcagtttcttctgaagagaggggcccttttt
ctctgtgattataaaggctggacagccctgcaccatgctgccttcggaggatacactcgc
acaatgcagatcattttggatactaatgtgaagtgtactgacagagtggatgaagaaggg
aacacagctttgcacctggctgcaagagaaggacatgcaaaagcagtaaggttacttctt
gactatggtgcaaaaattctgttcaacaaagcagtagcttcttttttccatgaagcaata
cacaataggagaaaagatgtagtgtctgctgtcattttacacaaaaggtgggaagaagct
gttgtgacattttctcactattctagtgccaataagtgtcctttactggaaatggttgag
tatcttcctgattcattcaaactggttttggacaactgcataattgagtcttcagaggaa
aagacaagtcgagacttctatattgaatataacttcagatatcttcagtgtcctctgaca
cttaacaagaaactaaaggatggtgaagacattttctatgaaccacttaccactttaaat
gccatggtacgccacaatcgcatggagctacttagtcatcccgtgtgtaaagaatatttg
cttatgaaatggatggcctatgggtttcgagcgcatctgatgaatttaggcatatattct
ctcggtctcatcccactgactcttctggtcactcacatacagccaggaagacctttgaat
ggaacagagatctatgaagcaagaccattagaatatgagaactcatacttcacaagggtg
tgtatgtgtttagttttaataatgagtttactgggaatctgcaaagaaatatttcagctg
attcagcagaaattgaaatatttgttggattactccaatctactggactggacaatttat
actacaagcataatttttgtgtcttctttatttattaatacaccagctcatttgcagtgg
gaatgtggagcaattgctgtatacttgtcttggatgaacttcttgctttaccttcaacga
tttgaaaactatggcatctatgttgtgatgttctgggaaattttgaggactttgattcgg
attgctgttgttttctttttcctgatactggcctttggactgagtttctttgtccttttg
ggttcacagcaaacatatagcacacctctgctttctgtaatgaagacatttgcaatgatg
ctgggagacattaattaccacgatgcattccttgatccattactaagcagtgaattgcca
tatccattcctgagttacacagttctcattatatttaccttgcttattccaatccttctt
atgaacttgctaattggtttggctgttggggacatagctgaagtacaaaaatacgctgca
cttaaaaggattgcaatgcaggttaatcttcacaccaacttagagaagaagctaccattt
tggttcttaagtcgggtggaccaggaatcgatcactgtatatccgaacaggccgagatac
tgtggatttatgagcgtgttccagtattgctttgggtgtgaggactctaccacagatgca
cagagcactgatacaacattagaactggaagttctgaagcagaaatacaggctcaaagat
atatcaacactgttggaaaagcaacatgacctcattaaattgattatacaaaaaatggag
atagtgtcagaggctgaggatgaagacagcaatgatttatttcagcacaagtttaggaaa
aggcaattagagcacaagaatagtaaatgggatacagtgttaaaagctgttaaaacaaat
gtgcctaacccaagcacagaaaagaacaatagcttcttctag
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integrated database retrieval system
