Cariama cristata (Red-legged seriema): 104161424
Help
Entry
104161424 CDS
T08341
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccri04131
]
104161424 (DENND4C)
Membrane trafficking [BR:
ccri04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104161424 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104161424
NCBI-ProteinID:
XP_009698170
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MTAEVYGAAIQFYEPYPRELLTEKQQLQLGLLTAVERKVVTSKSINSNKCICLLSHWPFF
EAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPFPSPQRPRILVQLSAHDALILSQPV
STPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKILLHSLRPAVLTGVAEAVVAMIFPF
QWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLYDPPQDIVCIDLDTNMVYISDDKKS
TNWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQEGSAVEMTPIEADFSWQKKMIELEMEI
QEAFLRFMASILKGYRTFLKPITQAPSNKATAADSLFDHQGFLKSRDRAYTKFYTHLTKT
QIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKGEKVDVDSVEDARLIELDESQK
SEHTVFIMPPEPPTDDGQDRMPKYSYKNFPRLDFKLFDRPQELKLSFSRHPAGSSISNSP
ALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLFSHSYSLWFICLPAYIRVAHPKVKALQQ
AYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQAVRVLFEMKNAGIQPNAITYGYYN
KAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCLKKSTQSPRVAVISALRSTTGGSDG
DMVSHGSVDSSNDANSGEHTVFVSDLVRLDSVDNHSSTGGQSDQGYGSKDELLRDDGDSL
HATETQVEKDISSKTEDLIGEVCTEKSDEKQQLNVETHSPTDPPAWGNSIVKVPSGIFDS
SGRKSSGETGSSPLFISQDSVEDVVFGDVSPKKTSEKRQKRQKLFSERSCSFSSAXXXXX
XXXXXXGMLLKKGSLDLHAEEIAIMMGADAKILTAALSGAKTSPCCVNKSHSFESIIDQH
VSGISGTWSCVTESDWELEHRSSPVPEEPGEGHEHLENGRDENMTTVEDINLEQSAESKN
QKAEPKDATTKRNSFYGVVKPVEREDVEVGLDPLSLLATDSMQPKHPEPDEKLVSPVAAR
NLADEIESYMNLKNPLGSKFPSMELNKPDRQAETCGTLGHSQERRSSLPLDSVLPSPKTY
ENRRSPSVSRSKTFTGRPKQQTHPRVQKERSSSLTGLGRSSPHGSLGSVVTTLSNLKLDN
ILSGPKMDVLKSGMKQAANVASKMWGVVTSAYSYSDDEEENNRPDFNFPAGLEDNILGDN
LSHRTGVPGLITNELAQSTTSLVSSSSSGDAGRQHYSAGEVSFPRSMKVLDSEKSEHSSS
HNTSLSSIFQNYAMEVLMSSCSQCRACGALVYDEEIMAGWTADDSNLNTTCPFCKSTFLP
LLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLLSSPAVADLISFSDHPQS
SHTIAEETLSTAEQSDVAEEQSKDPRTMKMSTNNPPKRGVSLTRSHSVGGPLQNIDLSQR
PSHGTSTVSLPNSLQEVVDPLIKRPNPLPVSVPYLSPLVLHKELESLLENEGEQVIHTSK
FINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLTSLAQDSKLVYIHLLWD
NINLHQEPGEPLYISWRNLNSSEKRHSTVAEDQQATNTLLENIKLSIQHNNVVKPINLLL
QKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHKNLPKDILEKMEKIDAP
PSSRVECCRKCFGPPLI
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaagtttatggtgctgctattcagttttatgagccttatccccgggagctg
ctgacagaaaaacaacaattgcagctgggtctcctgacagctgtagagaggaaggtggtt
acctccaagtccatcaactccaacaaatgcatctgccttctgtcacactggcctttcttt
gaagcatttcgaaaatttcttatgttcatctacaaactgtctgtctctggacctcatcct
cttcccattgaaaagcacatatcccattttatgcacaatatacctttcccttcaccacaa
aggccaagaattcttgtgcagctttctgcccatgatgcattaatactgtctcaaccagtt
tctacaccattgccattaagtggagcaaactttagcactctgctgatgaatcttggaccg
gaaaactgtgccactctgttactctttgtattgctagaaggcaagatcctcctccattct
cttagacccgctgtgttgacaggagtcgctgaagctgtagtagctatgatatttccgttt
cagtggcaatgtccgtatattccgctctgccctttgtctctggccactgtactcagtgca
cctgttccgtttattgttggagttgattcacgatactttgatctatacgatccgccacag
gatattgtgtgcattgacttagacacaaacatggtgtacatatcagatgataagaagagc
accaactggaagcagtttcctaagaagccttgtaaaagtctgctcagcaccttaaagaaa
ctgcacccacagctggcggcagttcacaggaaaactcaagaaggctctgcagtggagatg
actcctattgaggcagatttctcctggcagaagaagatgatagaactcgagatggagatc
caggaagcttttctccgtttcatggcatctattttaaagggttacagaacattcctcaag
ccaatcacacaggcgccttcaaataaagcaactgctgctgattcattgtttgatcatcaa
ggatttttaaaaagcagagaccgtgcctatacaaagttctacacacatctcaccaaaacc
cagatattcagccgctttattgaagagtgcagttttgtgagtgacaaggatactggcttg
gcattttttgatgactgcatagaaaagctcttcccagacaaaggaacagaaaaaggagag
aaggttgatgtagattccgttgaagatgcacggttgattgagcttgatgagtcacaaaaa
agtgaacacacagtgttcataatgccaccagaacctcccactgatgacggacaggaccga
atgccaaaatacagctataaaaacttcccacgactagatttcaagctctttgacaggcca
caggaactcaagctctccttcagcagacacccagctggaagcagcatttcaaatagtcca
gcactcatggcaaagaggacaaagcaggagataaaaacagctcataaattagccaagaag
tattatgtaagccccccacagtgggctaagtgtctcttcagtcatagttacagcctatgg
tttatttgtctgccagcctacatcagagttgcacatcccaaggtcaaagcactgcagcaa
gcatatgatgttctaattaaaatgaggaaaactgatgtggaaccactagatgaggtctgc
tatagagttgtaatgcagctctgtggactgtggggtcagcctgttcaagctgtgagagtc
ctctttgaaatgaaaaatgctggaatacagccaaatgccatcacctacggttattacaat
aaggcagttttagagtctccttggcctagcagtaaccgcagtggcatattcctgtggaca
aaggtacgaaatgtagttcgtggcacagcacaatttaggcaatgcttaaagaaatcaacg
cagagtccacgagtagctgtgatatcagctctgcggagtaccacaggtggaagtgatggg
gacatggtgagccatggtagcgtggatagttctaatgatgctaacagtggggagcacact
gtcttcgtcagtgacttagtcaggcttgattccgttgataatcactctagcacaggtggt
cagtcagaccagggctacggatccaaggatgaactgttaagagatgatggggatagtctt
catgcaactgaaacacaagtagagaaagatatttcttctaaaactgaagacctaatagga
gaggtttgtactgagaaatctgatgaaaagcaacagctgaatgtagaaactcatagtcca
acagacccacctgcttggggtaacagtattgtgaaagttccatctggcatttttgatagc
agtggaaggaaaagcagtggtgaaactggttctagcccactgttcatatctcaggattca
gttgaagatgtagtctttggtgatgtttctcctaagaaaacaagtgaaaaaagacagaag
aggcagaaactcttttcagagagaagctgcagtttcagcagtgcaagnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnggaatgctgctgaaaaaaggcagcttggacttgcatgctgaa
gaaatagcaataatgatgggagcagatgccaagatcctaacagcagctttatccggggcc
aaaacttcaccctgttgtgtgaataaatcccacagctttgaaagcatcattgaccagcac
gtttctggcataagtggcacttggagttgtgtgaccgagagtgactgggaattggagcat
aggtcttcaccagtgccggaagaacctggggaggggcatgagcatcttgagaatggaaga
gatgaaaacatgaccacagtggaagacataaaccttgaacagtcagctgagtccaaaaac
cagaaagcagaacccaaagatgcaactactaaaaggaatagcttttatggagtggttaag
cctgttgaaagggaagatgttgaagtcggcttggaccctttatctttgctggctactgac
agtatgcaaccaaagcatccagaacctgatgaaaagttggtgtcaccagttgcagcacgt
aatttggcagatgaaatagagagctatatgaatctgaagaacccattgggtagtaagttt
cccagcatggaactgaacaagccagataggcaagcagaaacctgtggtacacttggtcac
tcccaagaaaggaggtcaagcctgcctttggactcagttctgccatcccccaagacttac
gaaaaccggagaagtccttctgtctccagatccaaaacattcactggacgaccaaagcaa
caaacccatccacgagttcaaaaggagcggtcttcatctttgacaggactgggtcgttct
tctccacatggctcgttaggatctgttgtaacaactttatccaatctgaagttagacaat
atactgtctgggccaaaaatggatgttctgaaatcgggcatgaagcaggctgccaatgtg
gccagtaagatgtggggagttgtaacttcagcatatagttactcagatgatgaggaagaa
aacaatcgaccagactttaacttccctgctggtttagaagataatattttaggagataat
ctgtcacacagaactggagtcccagggctaattacaaatgagcttgcacaaagcactact
agtcttgtcagtagcagtagcagtggagatgcaggaagacagcattacagtgcaggtgaa
gtttcattcccaagaagtatgaaagttctagattctgagaagtcagagcacagctcttca
cataatactagtttatccagcattttccagaactatgcaatggaggtattgatgtcaagc
tgctctcaatgtagagcttgtggtgctttagtttatgatgaagaaattatggctggatgg
acagcagatgattcaaacttgaacactacctgccctttctgtaaaagtaccttcctacct
ttacttaatgttgaatttaaagacctccgtggctctgctagctttttcctgaagcaaagt
acctcaggagacagtttacagagtggtacccttccattaaccacggatcccctggagcag
aaactgttgtccagtccagctgttgctgacttgatcagtttttcagatcacccacagtcc
agccacaccatcgctgaagaaactctttctacggctgagcagagtgatgtggcagaagaa
cagagtaaagatcccagaaccatgaagatgtctaccaataatccaccaaaaaggggagtg
tccttgactcggagccacagtgttggaggtccactgcaaaacatcgatctttcccagaga
ccgtctcatggcacttcaacagttagtcttccaaatagtttgcaagaagttgtggatcct
ttaataaaaagacctaaccctctccctgtatctgtaccctacttgagccctttggtactg
cataaggaacttgaatcactgttggaaaatgagggagaacaagtaattcatacatctaaa
ttcatcaatcaacaccccataattttctggaacctagtttggtatttccgacgattggat
ctacctagcaacttacctgggctcattctaacatctgaacactgtaatgatggagtgcag
cttcccttgacatctcttgctcaagatagcaagctagtatacatccatcttctgtgggat
aatatcaacctccaccaagagccgggggagcccctgtatatatcttggagaaatctcaat
tcttctgaaaagagacactccacagtggcagaagaccagcaggcaacaaacactttgttg
gagaacatcaaactaagtattcaacacaataatgttgttaaaccaatcaacctccttcta
cagaaagttaagccagatgtaaaacgacagaggagtttttacagagaaattcttttcctg
tctctggtgtctcttggaagagagaacattgacattgaggtctttgatagtgaatacaga
cttgcacataaaaatctaccaaaggatattcttgaaaagatggagaaaatagatgctcca
ccaagcagcagggttgagtgctgtaggaagtgctttggaccacctttaatataa
DBGET
integrated database retrieval system
