Cariama cristata (Red-legged seriema): 104161603
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Entry
104161603 CDS
T08341
Symbol
PCDH12
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-12
KO
K16499
protocadherin delta 2
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccri04515
]
104161603 (PCDH12)
Cell adhesion molecules [BR:
ccri04515
]
Cadherins
Protocadherins
104161603 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
LRV
Motif
Other DBs
NCBI-GeneID:
104161603
NCBI-ProteinID:
XP_009698399
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MRRQAGKPVAACRGSGALGFASSMLLLSRSALHLPALWWYLFLSADAQEVATFTVQYRVF
EEVPPGTVIGTLAEHFEGGESGETADTFQLMETPGRFPLHVGSGDGMLSTAGRVDREQLC
RHSDPCWVSFDVLAARNLALIHVEVQVLDVNDNAPQFPTPELELEMSESASLRTRIPLDR
ALDADAGPNARCSYALSPSEHFALEVVSSSDGTRHAELVVVKEVDRELHSSFDLVLTATD
NGEPPKSGTASIKVIVLDSNDNSPVFAESSLTVEVREDALPGTLLVTVTATDPDQGPNGE
IEYSLSKHAPPEVLSAFGIDTRTGSIILKHPLDYEETHAYELDVQARDLGANPIPAHCKI
LVKVLDVNDNAPDVHVTWATRVPVLSEALPKDSFVALVTASDPDSGSNGQVHCSLSQGYE
HFRLKRTNSHSYVLMTNATLDRELRAEYNLTLVVRDQGDFSLAVLKHLTICISDVNDNAP
SFEKATYEVAVAENSEAPAFLLTIRATDPDLGLNGKITYSILDSSALGLVSIDPTTGDVF
VLQAFDYEQVRSLEFLVTAEDGGHPKLTSNVSIRLAVLDRNDNAPVITTPVLVGGAAMLS
VLVNVETGCFWVVPGNGSTQGTAVVTNATLVSCASAPFLFTITARDEDSGINGALRYDLV
GGDDAGLFILDPLLGQVFLNASNASSLAGSEQELVVRVSDEGDIPLHTLARVCLVFRHHG
AFSKISAQHPGWLSPSMVVVICLAALLGGCLLLLALTLSLRKKEKKDGMAYNCREAEDAR
RQQQLKKPHRQIQKTDIHLVPLLRGRPREAEHPHPCQEDLPSTAAPAPGGSPQSPLHLTP
TLYRTLRNQRTQKDSDEQQGTLNLPILQRRPCQPHRPKHLVKEAASPPDAPPHCKSLVKP
PQGPPVGAGGPGQPQPHQHILRSLVRLSLVALAEQSPTGEFVMESPPVQQISQLLSLLHQ
GQFQPKTNHRGNKYTAKNGSRAAGLDADCLSTKDSGHGESEAEDRDSESGFELSVQQLVG
EELETLLEPQAELALKRLTAADPAWVARLSLPLTSSYKDNVFSPDSLQSPQDDEAARQEK
PRTFETFGKGAGADSNAAGTRLASTFLSEMSTLFEMILSQKVQVHNETGSGLLRQLSAHG
KSLGLEDSAPVL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgacaggcaggcaagcccgtggcagcgtgccggggcagcggggcactgggcttt
gccagcagcatgctgctgctgagccgctccgctcttcatctcccagccttgtggtggtac
ctcttcctctctgccgatgcccaggaggtggccacgttcacggtgcaataccgggtgttc
gaagaagtgccaccgggaacggtgatagggactctggccgagcactttgaggggggtgag
agcggtgaaacagcggataccttccagctgatggagacccccgggaggttcccgctgcat
gtggggagcggggatgggatgctcagcacggccgggcgggtggacagggagcagctgtgc
cggcacagcgatccctgctgggtctcgtttgatgtgctggctgcccgaaacctggctctg
attcatgtggaggttcaagtgctggatgtcaacgacaacgcgccgcagttccccacgccc
gagctggagctggagatgtcggagagcgcatccctgcggacacggatcccactggatcga
gccctggatgccgatgctggccccaacgcccgctgctcctacgccctttcccccagcgag
cactttgctctggaggtcgtctccagctccgatgggacgaggcatgcggagctcgtcgtg
gttaaagaagtggaccgggagctgcactcctcctttgacctcgtgctgacagccactgat
aatggggagccgccaaaatcaggtaccgcttcaattaaagtcattgtcctcgactccaac
gataacagccctgtctttgccgagagctctttgacggtcgaggttcgggaagatgctctg
cccgggaccctcctcgtgacggtcacagccacggaccccgaccagggtcccaatggggag
atcgagtacagcctgagcaagcacgcacccccagaggtgctgagcgcttttggcatcgac
acccgcacaggcagcatcatcctgaagcatccactggactacgaggaaacccacgcctac
gagctggatgtgcaagcccgggacctgggtgctaacccaatcccagcacattgcaagatc
ctggtcaaagtcctggacgtcaatgacaacgctcccgacgtccatgtcacctgggccacg
cgggtgcctgtgctctccgaagcccttcccaaagacagctttgtggctctggtgacggcc
agtgaccccgactcgggaagcaacgggcaagtgcattgctccctcagccaagggtacgag
catttcaggctgaagaggaccaacagccacagctacgtgctgatgaccaacgctacgctg
gacagggagctgcgtgccgagtacaacctgacgctggtggtgcgggaccagggtgacttc
tccctcgccgtgctgaagcacctcactatctgcatcagcgacgtcaacgacaacgccccc
tccttcgagaaggccacctatgaggttgctgttgctgagaacagtgaagcacctgccttc
ttgctcaccatccgtgccaccgaccccgacctgggtttaaatggtaaaatcacctacagc
atcctggactcctctgctttgggtctggtctcaatcgaccccaccactggggatgttttt
gtgctccaagcttttgattatgagcaggtgaggagcctggagttcctggtgaccgcggag
gatggtggtcaccccaagctgacgtccaacgtctccatcaggctggctgtgctcgaccgg
aatgacaacgcacccgtcatcaccacgccggtgctggtgggaggtgcagccatgctctct
gtcctggtcaatgtggagacggggtgcttctgggtggttcccgggaatgggagcacccaa
gggactgcagtggtgaccaatgcaacactcgtgtcctgtgccagcgctcccttcctcttc
accatcacggccagggatgaggactctggcatcaatggggctctccggtatgatctggtg
ggtggggatgatgctgggctcttcatcctggaccctctcttggggcaggtctttctcaac
gccagcaatgccagcagcctcgctggcagcgagcaggagctggtggtccgggtgagtgac
gagggggacatccccctgcacaccctggcccgggtctgcttagttttccggcatcacgga
gcgttctccaaaatctcagcccagcatcctgggtggctgagcccgtccatggtggtcgtt
atctgcctggctgctctcctgggtggctgtcttctccttttagctttaaccctgtctttg
cggaagaaggagaagaaggacggcatggcctacaactgtagggaggcagaggatgcccgc
aggcagcaacagctcaagaagccgcacaggcagatccagaagacagatatccaccttgtc
ccgctgctccggggccggccccgggaggctgagcacccccatccctgccaggaagatctg
cccagcacagctgcccctgcgccggggggctccccacagtctcccctccacctcaccccc
actctctacaggaccctgagaaatcagaggacccaaaaagactcagatgagcagcagggg
accttgaacctgcccatcctgcagcgccggccctgccagccccacagaccaaaacacctg
gtgaaagaggctgcgagccccccagatgcaccaccgcactgcaagagcttggtgaagcca
ccgcaggggccccctgtgggtgctgggggacctgggcaaccccagccccaccagcacatc
ctcaggagcctggtccggctgtcgttggtggcactggcggagcagagccccactggggag
tttgtgatggagtcacccccagtgcagcaaatctcccagctgctctctctgctgcaccag
ggccagttccagcccaaaacaaaccacaggggaaacaagtacacagccaagaatggcagc
agggctgcagggctggatgctgactgcctgagcacgaaggacagcgggcacggcgagagc
gaggcagaggaccgcgattcggagagcgggtttgagctctcggtgcagcagctggtggga
gaggagctggagaccctcctggagccacaggcagagctggccctcaagaggctgacggct
gctgatccagcatgggtggctcggctctccttgccgctcaccagtagttacaaggacaac
gtcttctcccctgactctctgcagtcacctcaggatgacgaagctgccaggcaggagaaa
ccgaggacctttgagacctttggcaaaggtgctggggctgactcgaatgccgctgggaca
agactggccagcactttcctttcagaaatgagtaccctctttgaaatgattttgtcccag
aaggtccaagtccacaatgaaacaggctcggggcttctgcggcagctgtcggcacatggg
aagagccttgggctggaagacagtgctcctgttctgtag
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