KEGG   Cariama cristata (Red-legged seriema): 104161649
Entry
104161649         CDS       T08341                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ccri  Cariama cristata (Red-legged seriema)
Pathway
ccri03420  Nucleotide excision repair
ccri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104161649 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104161649 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccri04121]
    104161649 (DDB1)
   03400 DNA repair and recombination proteins [BR:ccri03400]
    104161649 (DDB1)
Ubiquitin system [BR:ccri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     104161649 (DDB1)
DNA repair and recombination proteins [BR:ccri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104161649 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104161649 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 104161649
NCBI-ProteinID: XP_009698457
LinkDB
Position
Unknown
AA seq 1119 aa
HFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKTAVMELFRPKGESKDLLFILT
AKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFK
VIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKE
FNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCH
NRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGV
VFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGA
FKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRETDNTLVLSFVGQTRVLMLNGE
EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVA
SCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSPLCAIGLW
TDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETG
VRSYRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCP
LNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIE
VQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEV
LHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSL
AEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMALYLKTKGDFI
LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS
AATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT
SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS
RPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq 3362 nt   +upstreamnt  +downstreamnt
ggcacttcacctctgcggaggatttgaacctactgatcgccaagaatacgcgactggaga
tctatgtggtgacagcggaagggctgcgacccgtcaaggaggtggggatgtatggcaaga
ccgccgtcatggagctcttccgccccaagggggagagcaaagatttgttgttcatcctga
cagccaagtataacgcctgcatcctcgagtacaagcagaacggggacagcattgatatta
taacccgtgcccatggcaacgtgcaggatcgcattggccgtccctcagagaccggcataa
ttggcatcattgacccagagtgccggatgatcggcctgcggctctatgatggcctcttca
aggtcattcccctggatcgggagaacaaggagttaaaggcatttaacatccgcctggaag
agctccaagtcatcgatgtgaagtttctctatggctgtcaggctccgaccatctgctttg
tctaccaggaccctcagggtcgccacgtcaaaacgtacgaggtgtccctgcgcgagaagg
agtttaacaaaggtccatggaaacaggagaacgtagaggccgaagcctccatggtcattg
cagtgccagagcctttcggaggcgcgatcatcattgggcaggagtctatcacctatcaca
acggagataaatacctagctatagctccacctatcatcaagcaaagtacaattgtgtgcc
acaaccgcgtggatcccaatgggtcccgttacttgctgggggacatggaaggacgcctct
tcatgctgctcctggagaaggaggaacagatggatggcaccgtcaccttgaaggacctcc
gcgtggaactgctcggtgagacatccattgcagagtgcttgacctacctggacaacggag
ttgtgtttgtcggctctcggcttggggattcccagcttgtgaagctcaatgtggacagca
acgagcagggctcctatgtagtggctatggagaccttcaccaacctcggtcccatcgtcg
atatgtgtgtggtagacctggaaagacaaggacaagggcagctggtcacatgctcaggtg
cgtttaaagagggttcgctgcggatcatccggaatggcattgggattcatgagcatgcca
gcattgacttgccggggattaaaggcttgtggcccctgaggtcagactctcatcgtgaaa
cggacaatacgttggttctgtcctttgttggccagaccagagttcttatgttaaatggag
aggaagtagaagagacagagctcacggggtttgtagacgatcagcagactttcttctgcg
gcaatgtggcacatcagcaattgatccagattacctctgcctctgtgagactggttagtc
aggagcccaaagccctggtgagcgagtggaaggagcccaacggaaagaacatcagcgtgg
cttcctgcaacagcaaccaggtagtggtggctgtgggacgagccctgtactacctggaga
tccggccccaggagctcaggcagatcagctgcacagaaatggagcatgaagttgcctgcc
tggacatcacccctttgggggacactaacggcatgtccccgctgtgtgcaatcgggctct
ggactgacatctctgcccgcatcctaaagctgccttcatttgaactgctgcacaaagaga
tgctgggaggagaaattatccctcgctccatcctgatgacgaccttcgagagcagccatt
acctcctgtgtgccctgggggacggagccctcttctactttgggctcagcctggagacag
gtgtgcggagttatcggaagaaggtgacccttgggacccagcccaccgtcctaaggacct
tccgctccctgtccaccaccaacgtgtttgcctgctctgaccgccccactgtcatctaca
gcagtaaccacaagctggtcttctccaacgtcaacctgaaggaggtgaactacatgtgtc
ccctcaactcggatggctatcccgacagcttggcgttggccaataacagcaccctgacaa
ttggcaccattgacgagatccagaagctgcacatccgcacggttcccctctatgaatcgc
ccaggaagatctgctaccaagaggtatcgcagtgtttcggcgtgctctcaagtcgtatcg
aggtgcaggatgccagtggaggtaccactgcgctcagacccagcgccagcacccaggccc
tgtccagcagcgtgagcaccagcaagctgttctccagcagcacagcaccgcatgagacat
ccttcggagaggaggtggaggtgcacaacctgctcatcatagatcagcacaccttcgaag
tgcttcatgctcaccagtttctgcaaaacgaatacgccctcagcctggtctcctgcaagc
ttggcaaggatccaaacacctacttcatcgtgggcaccgccatggtatatcctgaggagg
cagagcccaaacagggccgcatcgttgtcttccactactcggatgggaagctgcagagcc
tggctgagaaggaagtcaagggggctgtgtattccatggtggagttcaacgggaagctgt
tagccagcatcaacagcacggtgcgcctgtatgagtggacagcagagaaagagctgcgca
cagagtgcaaccattacaacaacatcatggcgctctacctgaagactaagggggacttca
tccttgtgggagacctgatgcggtctgtcctcctccttgcttacaagcccatggaaggaa
actttgaggagattgcccgggacttcaatccaaactggatgagtgccgtggagatcctgg
acgacgacaacttcctgggagcagagaacgctttcaatttgtttgtgtgccagaaggaca
gtgcggccacgacggatgaggaacgccagcacttgcaggaggtggggctgtcccacctgg
gagagtttgtcaatgtcttctgtcacggatctctggtcatgcagaacctgggtgagacgt
ccacaccaacacagggctcggttctcttcggcacagtcaacggcatgattggactggtga
cctcgctgtcggagagctggtacaacctcctcctggacatgcagaacaggctgaataaag
tcatcaagagcgtgggcaagattgagcactccttttggagatcatttcacaccgaacgca
agacggaaccggctacggggttcattgacggtgacctgattgaaagcttcctagacatca
gcaggcccaagatgcaggaggtggtggcaaacttgcagattgatgacggcagcggcatga
agagggaggccaccgtagacgacctgataaagatcgtggaggagctgacccggatccatt
ag

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