Cariama cristata (Red-legged seriema): 104162018
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Entry
104162018 CDS
T08341
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104162018 (TAF1B)
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104162018 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Motif
Other DBs
NCBI-GeneID:
104162018
NCBI-ProteinID:
XP_009698948
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
RDFNERCAQCSEVNWGLTDGGRFYCKSCHNVTERTREVVNTDFISNARVQTISKGLRKEK
KTDGDCEWYVCEGFQLVLKKQAEALEALGVCPQMKDKILCNFWRCYLQKSKQAYCNRPAG
ETVKALSVCDSSTDVDSEPERPGLLHLLSLSESEGDLQTDCSFASSTSKVSASTSVCSGS
VDGRFYLMKNQKENLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYLNVFQHF
PEKMKLCGLDLKIFCVESWPAYEEVYNKMLELAAFLDLPRFPDITDSCFLHPDILCMKYL
MEANLPDELHNWTCRVVKKICIGEADFLTLVPGNKSTRKVKYDVLAAAVIVVVLKLLFLL
DDHYEWLLSDFAEERNKNNKEGDGGPYFEFKKWYKVIKCSLDVEQKKLDEERAKYLWRCE
KPLFYSAEKKSKVLKRRQMVVNLQNQFGKLCGSVPPAEKRNPSSFQLSWSEEDTNGSCFH
GHSLKGILQEKCGLLTAMNPDYWLCTVKLCTEKLCGHLAHYREVDFPQSYHFVLRLFSFL
LRIQPSFIHDEVCMIEHKLFNKRLCKKPKYNRGLRK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
agagattttaatgaacgctgtgcccaatgttcagaagtgaactggggtctcactgatgga
ggcagattttactgcaagtcttgtcacaatgttactgagagaactagagaagttgtaaac
actgattttatttctaatgcaagagtccagacaatctccaaaggtttaagaaaggagaaa
aaaactgatggagactgtgaatggtatgtttgtgaaggctttcagcttgtactcaagaaa
caagctgaagctttagaagcattaggagtatgtccacaaatgaaggataaaattctgtgc
aatttttggaggtgttaccttcagaagagcaaacaggcatattgcaacagacctgctggg
gaaactgtcaaagcattatcagtatgtgacagcagtactgatgtggacagtgaaccagag
agacctggccttcttcatttgttgtctctttctgaaagtgagggagatctacagactgac
tgcagctttgcctcatcaactagcaaggtctcagcaagcacctctgtgtgctctggatcg
gtagatggtaggttttatttaatgaagaaccaaaaggagaatctgaggatgacgatgcca
atgaccctttcattttgttacatggcattactctggttgagagaaccaatgacgttatct
gatctcttaaggtttgttgttgaaggtcatattccatatttgaatgtttttcagcatttt
cctgagaagatgaaattatgtggacttgatcttaagatcttttgtgtagagtcgtggcct
gcatatgaagaagtatacaacaaaatgcttgagcttgcagcgtttttagacctgcctcgt
tttccagatataacagacagctgctttcttcatccagacatattgtgcatgaagtacttg
atggaagctaatttacctgatgaattgcataattggacttgtcgagtggtgaaaaagatc
tgtattggagaagcggatttcctgactcttgtgcctggaaataagtcaacaagaaaagtg
aaatacgatgttcttgctgcagcagttattgtagttgtgctcaaattattgtttttatta
gatgatcactatgaatggttactttcagacttcgctgaagaaagaaataaaaataacaaa
gaaggtgatggtggtccatattttgagttcaaaaagtggtacaaggtgataaaatgttcc
ttggacgtggagcaaaagaaattggatgaagaaagagccaagtatctgtggagatgtgaa
aagccactgttttattcagccgagaagaaatctaaagttcttaagagaagacaaatggtt
gtgaacttacaaaatcagtttggcaagctgtgtggttcagtgccacctgctgaaaagcga
aatccttcaagttttcagttaagttggtctgaagaagacacaaatgggagctgttttcac
gggcatagcctgaagggaatcttgcaagaaaaatgtggtttacttacagccatgaaccct
gactattggctgtgtacagttaaactatgtaccgagaaattgtgtggtcatctggctcat
tacagagaagtggactttccccagagttaccattttgtactaaggttattctcctttctt
ctgaggatacagccttcttttatccatgatgaggtgtgtatgatagaacacaaacttttt
aataaaagactctgtaaaaagccaaaatacaacagaggcctaaggaagtaa
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