Cariama cristata (Red-legged seriema): 104162050
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Entry
104162050 CDS
T08341
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccri03016
]
104162050 (TRUB1)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104162050 (TRUB1)
Transfer RNA biogenesis [BR:
ccri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104162050 (TRUB1)
Prokaryotic type
104162050 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
104162050
NCBI-ProteinID:
XP_009698991
LinkDB
All DBs
Position
Unknown
AA seq
234 aa
AA seq
DB search
MGQLVHEKEAFCQLQQILPYTHSLAVLRVEMGKNEDIRLDSIISLFPSQKYTAIGLLGKA
TDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGE
AVEAKPARPVRVYSLSLQQXKNTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHG
PFTLEEHALYEDKWTIDEIARSLEHCTSLLPGEPSHKKLKTEHPSETAVSCEDK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggggcagctggttcatgagaaggaagccttctgtcagcttcagcagattctgccatat
acccacagcctggctgtacttagggtagaaatggggaaaaatgaggatatcagacttgac
tcaataatctctctttttccttcccagaagtatactgccattggactactgggcaaagct
actgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgaccagataaca
aaaggagatcttgaaaatgtgctgcaaaagttcacaggggacataatgcaggttcctcca
ctctattctgctttgaagaaggatggagaaaggctatcaactctgatgaagagaggagaa
gcagttgaagcaaagcctgctcggccagtaagagtgtacagcctctctctccaacagtaa
aaaaacacactggatgttgaatgtggtggtggcttttatgtcagaagcctggtcagtgac
attggcaaagaactctctacctgtgccactatgcaagagctgacccgaacgaaacacggg
ccatttacgctagaggagcatgccctttatgaagacaaatggacgattgatgaaattgca
cgatccttagagcattgcacgtctcttctcccgggagagccatcccataaaaaattgaag
acagagcatcctagtgaaactgctgtgagctgtgaagataagtga
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