Cariama cristata (Red-legged seriema): 104162230
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Entry
104162230 CDS
T08341
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104162230 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104162230 (DHX36)
03012 Translation factors [BR:
ccri03012
]
104162230 (DHX36)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104162230 (DHX36)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104162230 (DHX36)
Translation factors [BR:
ccri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104162230 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
104162230
NCBI-ProteinID:
XP_009699211
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPTPEQPAKVKPDAEKAPVRQRPVL
EKTHLDRDVEYLFEKNEQDTDLDEQLQEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSSST
IDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIAHLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQENESVRNY
APRFQSERYS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcagggaagagcaaattgtgcagttgttgaatactgtccaaactaaaaat
gaaaaagagcaagaagcaatgtcttggtggtccggggatgaagaaggacctactccagaa
cagcctgcaaaagtgaaaccagatgctgaaaaagctcctgtaagacagagaccagtcttg
gaaaaaacacatcttgatcgggatgtggaatatctctttgaaaaaaatgagcaggatact
gatttagatgagcaacttcaagaagacttaagaaagaagaaatctgatcctagatatatt
gaaatgcagagattccgagagaagctcccttcgtatgggatgagacaggaacttgtaaac
ctcataaacaataatcgagtaactgtgataagtggtgaaactggttgtggaaagacaacc
caagttacccagttcatcttggatgattacatagagcgagggaaagggtctacatgcagg
attgtttgtactcagcctaggaggatcagtgctatctcggtggccgagagagttgctgct
gaaagggcagaagcatgtggtaatggcaagagtacaggataccaaattcgtctacagagt
cggttaccaaggaagcaaggctcaattttatactgtaccacaggaattgttctacagtgg
ctccagtcagataagcacttgtccagcattagtcatgtagtccttgatgaaattcatgaa
agaaatcttcagtcagatgttttaatgagcattattaaagatcttttgaatattcgtttg
gatctgaaagtaatactaatgagtgctactttaaatgcagagaagttttcggagtatttc
gataattgtccaatgattcacatacctgggttcacattccctgtggtggaatatcttctt
gaagatgtaattgagaagttgagatatactccagaaaacacagaccgtcggccacggtgg
aagaaaggcttcatgcaaggacatgtaagcagaccagaaaaagaagaaaaagaggaaatc
tacagggaacgatggccagactacttaaggcagctgcggggcaggtattcatcaagtact
atagatgccttggaaatgatggacgatgacaaggtcgaccttgacctcatagcagcactt
atcagacacatcgttttggaagaagaggatggtgcaattctagtgtttcttccaggctgg
gacaacattagcactttgcatgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgtgaaccagactcaggtttttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcatt
acaatagatgacgtcgtgttcgttatagatggtggaaaaataaaggaaactcactttgac
acacagaataacattagcacaatggcagcagaatgggttagtaaagctaatgcaaagcag
aggaaaggtcgagcaggaagagttcagccaggccactgttatcatctatacaatggacta
cgtgctagccttctagatgattatcagttaccagagatcttgaggacacctttggaagaa
ctctgtttacaaatcaagattctaaagcttggtggaattgcttattttctgagcaagcta
atggatccaccatctcgtgatgctgtaatgttggccataaatcatctaatggaactgaat
gctttggacagacaagaagaactgactccactaggtgtccatttagcgcgattaccagtt
gaaccacatattggaaaaatgatcctctttggagctttattctgctgcttggatccagta
cttacaattgcagccagcctcagcttcaaagacccttttgtcattcctctgggcaaagag
aaagtagcagatgcaagaagaaaggaactgtcaaagaacactaaaagcgatcatctaact
gtggtgaatgctttcacgggctgggaagagactcggcggcgtggtttcagaactgagaaa
gactattgctgggaatatttcctatcttcaaatacgctccagatgctgcataacatgaaa
ggacagtttgctgagcatctccttgcagctggatttgtgaacagcagagaccccaaggat
cccaaatctaataccaactcagataatgagaagttgctcaaagcggtcatctgtgctggc
ttatatccaaaagttgcaaagatccggccaagcttcagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggaacagttaatattcatcctaaatcagttaatgtcgaagaa
acagagttccattataactggcttgtgtaccatttgaagatgagaaccagcagtatttac
ttgtatgattgcacagaggtctctccatactgtctcttgttcttcggaggagatatatcc
attcagaaggacaaagatcaggataccatcgctgtggatgaatggatcgttttccagtct
ccggcaagaatagcacacttagttaagaatttgagacaagagcttgatgatcttctacaa
gaaaaaatagaaaacccgcatcccgtggactggaatgatactaaatccagggatacagca
gtactgacagctattatagacttaatcacaacacaggagaatgaaagtgtcagaaactat
gctccacgattccagagtgaacgctatagttga
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