Cariama cristata (Red-legged seriema): 104162346
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Entry
104162346 CDS
T08341
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03013
Nucleocytoplasmic transport
ccri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104162346 (SRRM1)
03015 mRNA surveillance pathway
104162346 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104162346 (SRRM1)
03041 Spliceosome [BR:
ccri03041
]
104162346 (SRRM1)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104162346 (SRRM1)
Spliceosome [BR:
ccri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104162346 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104162346
NCBI-ProteinID:
XP_009699360
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
GTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVV
IEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELK
KEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSP
VRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEHSVKPKETVVQEATSNSDIPKAPK
PEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRSRS
RRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP
KKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRARKSRGSV
SPSRASAPKHKSTEKRESPSPAPKPRKADLSESEEDKGGKMAAADSVQQRRQYRRQNQQS
SSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPSPP
PARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRT
ASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRETR
SPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTK
ASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSRSPSANWSPAKKAKSPTQSPSP
ARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKNAAPAAAAAVAAADTTSAQEDQEAET
EPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
ggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttgaagcag
ttgaaatttgcagaatgcttagaaaagaaggtggacatgagcaaagtaaatctggaagta
atcaaaccatggataacaaaacgagtaacagaaatccttggatttgaagatgatgtagta
attgaatttatattcaaccagttggaagtgaagaatccagattccaaaatgatgcaaatc
aacctgactggttttttgaatgggaaaaatgctagggagttcatgggagaactgtggcca
ctgctattaagtgcacaagaaaacattgctggtattccaactgcatttctggaactgaag
aaagaagaaataaaacagcgacagatagagcaagagaaactggcttctatgaagaaacaa
gatgaagacaaggagaagagagataaggaagacaaagacaacagagaaaaaagagacaga
tccaggagtccaagaagacgtaaatcaaggtctccttcccctcgaaggaggtcatcgcct
gtccgaagagagcggaagcgcagccattctcgctcccctcatcacagaaccaagagccgt
agtgctactcctgcaccagaaaagaaagaggcaactcctgagccagaacactctgtgaaa
ccaaaggagactgttgttcaagaggcaacttcaaacagtgatatcccaaaagctcctaaa
cctgaacctcctgtaccagagactaaggaaacttcaccagaacgtaattcaaagaaggag
agagagaaggaaaaagagaagactcgtcaaagatccccaactcggtccaagtcaaggtca
agatctcgatcacgttctccatctcattctcgaccaagaaggcgtcatagatcacggtca
agaaggcgaccaagcccgagacgacggccatctccgaggcgaaggagccctccaaggcga
atgcctcccccacccagacacagaagaagcagatcccctgtgaggcggagaagacggtca
tcagcatccttatctggcagtagctcttcctcctcctcttcacgttcccgatcaccacca
aagaaaccacctaaaagaactgtatccagtcctcctcgtaagacgcgtaggctctctcct
tccgcaagccctcctaggcggaggcacagaccatccccaccagcaagtccacctccaaaa
ccacgtaggtctccaacaccccagcagtcaaatcgtgcaagaaaaagccgtggctctgtt
tcacctagcagagcatcagcacccaaacataagagtactgaaaaaagagaatctccttcg
ccagcaccaaaaccaaggaaagcagacctgtctgaatcggaggaagataaaggaggtaaa
atggctgcggcagattctgttcaacagaggcgtcagtacagaaggcaaaatcaacagtct
tcatctgattctggttcttcatcttcatctgaagaggaaagacctaaaagatccaatgtg
aagaatggggaagttggtagacgccgacgtcattcacattcacgcagtccatcaccgtct
ccacgaaaacgacagaaggaatcctcccctcgtaggaggaggagaagtccatcaccccca
ccagcccggcggcgacgctctccttcacctgcccctcctcctaggcggcggcggtcgcca
tcattacctcgtcgaaggtcaccatcaccacccccacgcaggcgctcaccttctccacgg
agatactccccaccgatacagagacgatactctccttctccgccacctaagagaagaaca
gcttctcctcctcctccacctaaacgaagggcatcaccttctccacagtcaaaacgcaga
gtctctcattcaccaccgccaaaacaaaggagctcgccagctgctaaaaggcgttcacct
tcaatatcttccaagcacaggaagggatctcctcccagtagatccaatcgggaaacacgt
tctccaccacaaaacaaaaggcattcaccttcaccacggcctagagcttctcatacctct
gcaagcccaccgccaccacgaaggggagcttcagcttcaccccagagaagacagtctcca
tctccaagcactagacccatcaggagggtgtcaagaacgccagaacctaagaagacaaag
gcttccacaccaagtccacgatctgcgagacgggtgtcttcatcacggtctgcatcagga
tcacctgagccagcaccgaaaaaacatcaaggacctccatctcccactcggtctcgttct
ccttctgcaaactggtcacctgcaaaaaaggctaaaagcccaactcagagcccatcacct
gcaaggaattcagatcaagaagggggtggaaagaagaagaagaaaaagaaggataagaag
cataaaaaggataaaaagcacaagaaacacaaaaaacataagaatgcagcgcctgcagca
gctgctgctgtggctgcagcagataccacctcggcacaggaagaccaggaagcagagaca
gaacccaaaaaggagacagaaagtgaaccagaagacaaccttgatgatctagaaaaacat
ctgcgagagaaggcactgaggtcaatgaggaaggcgcaagtgtcaccaccatcctag
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