Cariama cristata (Red-legged seriema): 104162422
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Entry
104162422 CDS
T08341
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104162422 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104162422 (SMG7)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104162422 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104162422 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104162422
NCBI-ProteinID:
XP_009699475
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLALQETSIAEPLSTDGSPGLKSVLSSGRSLNNNCDAGEKPMVTFKENIKPREMNR
EQARIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQV
KSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPV
AFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQ
TPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQ
TDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFP
MEPYNQNPSEVKVPDYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFED
PKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELM
SQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKPEVAPSVAHQETSLYSLFEGTP
WSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADR
WKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIW
SSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagctgaagtctggacgtccagacaagctctacaggac
ttatatcagaaaatgctagtgaccgatttggaatatgctttagataaaaaagtggagcag
gacctctggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaat
agagcaaatccaaatcggagcgaagttcaggcgaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgcca
tgtcgtgtaaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgcc
atagtgaagccgcaatctagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttattacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctatcttagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagcgtatctgacttcatcaaggcatttattaaattccatggc
catgtgtacctgagtaagagcttggaaaagctgagccctcttcgagaaaagctggaagaa
cagttcaagaggttgttattccaaaaggccttcaattctcagcagttagtacatattact
gttatcaatctgtttcaactacatcacctgcgagacttcagcaatgaaacggagcagcac
agctacagccaggatgaacagctctgctggacacagttactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcccttacaaaatgactaccaggaggactctggggctgca
tatcctcttccagctgtgaaggtttcaatggactggctgaaacttagacccagtgttttc
caggaggcagtggttgatgaaagacggtacatatggccctggctgatttctcttctaaac
agcttccagcctcatgaagaagatctatccaataataatgcaaccccccttccagaagaa
tttgagttgcaaggattcttggctctgaggccttcgttcaggaacttggatttttccaaa
ggtcaccaggcaattacaggagataaggaagggcaacaacgtcggatacggcaacagcgt
ctgatcttcacagggaaatggattgctgataaccagccgaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttttgacagaaatcccggaactattattagaggacccgagt
gaagccaaagagagtctcgccttgcaggaaacatctattgcagagccgctatctacagat
gggagccctggactcaaatcagttctgtcctctggcagaagcctgaacaacaactgtgat
gcaggagaaaaaccaatggtcacgttcaaagagaacatcaagccacgggaaatgaacaga
gagcaagcgagaatctatccccctaaagatgtaggcagggaaagacgggactatagcaaa
ggaatagtagccaacaagaatgatggaaagaaggataacaataaaagaaagaatgagacc
aagaaatgcggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtg
aaatcccagacagagatgaggaagactccggtgtctgaagccaggaaaacacctgtaact
cagactccaagtcaggccagcagttctcagttcatccccattcatcacccaggagccttc
cctccccttcctagccggccagggtttccacctccaacctatgttgtcccccctcctgtg
gctttctccatgagcacagggtataccttcccaggtggtgtttctgtcccaggaaccttc
ctccagcccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccac
attccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaa
acaccacctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtcc
gcgagccagttacaggtccaagctctggcccagcaacagcagcaacagtcccctactaaa
gctgtgcagggcctggggaagagcccgccacaccactccggattccagcagtatccacag
acagactcgtcaaagcagctctggaacccgcctcaagtccaaggctcactggggaagatc
atgcctgtaaagcagtcctattacctgcaggcccaggaccctctaaaattatttgaacag
tcattgcagcctcccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttccca
atggagccatataaccagaacccctcagaagtcaaggtgccagactattactgggactct
tcctatggcatggctgacaacagggtgatggcacagcagtctaacatggaccgcagggga
aaaaggcaaggagtcttccgcccagagcaggatgctgtctccaggatgacctttgaggac
cccaagagctcccctctgcttcctccggacctgttaaagagtctggctgccttggaggag
gaggaagagctgattttctctaatcctcctgatctttacccagctctgctggggcctctc
gcctctcttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatg
tctcagtcatcgtctttcctatccctcagtggcttttctcttaatcaggaaagatatcca
aataacagcatgttcaatgaggtatatgggaaaaacatgaataccagcacaaaaccagaa
gttgccccttcagttgcccatcaggaaacttcactatattctctctttgaagggactcca
tggtctccatcccttccagccagctcagatcactcgacaccagccagccagtctcctcac
tcctccaaccccagcagcttgccaagctcccctccaacccataaccacaattctgttcct
ttctccaacttcggacctattgggactccggacaacagagacaggagagtcgcagaccgc
tggaaaacagataagccagccatgggagggtttggtctggactatctcccagcgacatcg
tcatcttcggagagcagctggcaccagtccagtgcccccagtggcacctgggcagcccaa
ggccctcctgctatggaggattcctcagctgtgcttatggagagcctgaagtccatctgg
tccagttccatgatgcaccctggaccctcggccctggagcagctgttaatgcagcagaag
cagaagcagcaacgtggacaaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system