Cariama cristata (Red-legged seriema): 104162568
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Entry
104162568 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7-like
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccri03036
]
104162568
Chromosome and associated proteins [BR:
ccri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104162568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
DUF4812
Motif
Other DBs
NCBI-GeneID:
104162568
NCBI-ProteinID:
XP_009699626
LinkDB
All DBs
Position
Unknown
AA seq
2304 aa
AA seq
DB search
NKKPDSETSAAKKKVNKGKEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYT
EDLEFKISDDEADDADTAGRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEE
VEIEEFYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPD
YVEVDRIMDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREP
EMERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKT
IQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYE
MYFKDPQGRVIKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEG
LKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQA
ILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPN
LLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLP
KLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSY
EREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGS
KFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEL
DIDALNGRNNLVIDTPRIRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQG
YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENI
KSFIWDLITPTADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDV
LFQEDSYRKHLKHHCNKVLLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAE
VPADWWDKEADKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLA
DGGDGGEFDREDEDPEYKPTRTPFKDEIDEFANSPPEDKEESMEIQTNKHSEGNAELGQL
YWPNTSTLTTRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITE
KRQKWTRREEADFYRVVSTFGIIFDPVKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNM
CRRVCRMPVKPDDEPPDLSTMIEPITEXRTLYRIELLRKIREQVLHHPQLGERLKLCQPS
LDLPEWWECGKHDKDLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGMGNAITVS
VNPLGAGCSQTPPVVPSTPVQEEKTTEQMESKVEGSENPAAKEKTENKEETDIADKDTKP
DCDAEAEPSSVKCEVKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGSVS
QGKNFDEESNASMSTARDETRDGFYMEDGDPSVVQLLHERTFTFSFWPKDRVMINRLDNI
CEAVLKGKWPVNRRQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQAGVSGSEDITAS
PQLSKEDALNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVD
LSKASREATSSTSNFSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLI
DGEPPMKRRRGRRKNVEGLDLLFMSSKRTSLTVEDAEVTKAFEEDMETLPARNIPSPGQL
DPDTRIPVINLEDGTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKP
KQKRHRCRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAP
DWTDIVKQSGFVPESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINP
LLMNSLFAGMDLTSLQNLQNLQSLQLAGLMGFPPGLATAATAAGGDTKNPAAMLPLMLPG
MAGLPNMFGLSGLLNNPITATTGNATTTSGQGETGDGTSKAEEKKNENEEENKDSEKSTD
TVSATDSANGSVSAATAAXVTTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGL
GGLTLPGFPALAGLQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTANSSVLED
EIAQGEELDSLDGGEEIENNENDE
NT seq
6916 nt
NT seq
+upstream
nt +downstream
nt
taacaagaaaccagattcagaaactagtgctgcgaagaaaaaggttaacaagggaaagga
aggttctgaaaactcagatttggaaaaaactccaccaccatcacctcatcctgaagatga
agatgatccaggggttcagaagcgacgctccagcaggcaggtgaagaggaagcgttatac
agaagacctggagttcaagatttctgatgacgaggctgatgatgctgatactgctggaag
agactctccttcaaatacttctcagtcggagcaacaggaatctgctgatgctgaaggtcc
tgttgtggagaaaattatgagtagccgttcagtcaagaaaaagatggagaatggagagga
ggtagaaatagaggaattctatgtaaagtacaaaaacttttcttaccttcattgtcagtg
ggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcggtttaa
ggcaaaacagggccagaacaaattcctttcagaaattgacgatgagctttttaatccaga
ttatgtggaagttgatcgaataatggatttttcacgtagcacagatgataatggagagcc
tgtaacacattatctggtgaaatggtgttcacttccttatgaagacagcacttgggagct
caagcaagacatcgaccaagctaagatcgaagaatttgagaaactgatgtctagggagcc
agaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagttccag
ggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggcttct
tttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttgggaaagac
tatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcctttctt
ggttattgcaccattatctacaattcccaactgggagagggagttccgcacctggacaga
gttgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttgtatga
aatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttccatgccat
tattacaacatttgaaatgatcttgactgactgcccagagctgcgtaacattccatggcg
ttgcgtggtcatcgatgaggcccacaggctgaaaaacaggaactgtaagcttttggaagg
actcaagatgatggacctggagcataaagtgctgcttactggaacccctttgcaaaatac
tgtagaagagctatttagcttgcttcacttcttggaaccaggtcgcttcccatcagaaac
cacattcatgcaagaatttggtgatctgaaaactgaagaacaggtgcaaaaactccaagc
tattttaaaaccgatgatgctgagacgtctcaaggaggatgtagaaaagaacctggcccc
caaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatactatcgtgc
tattcttgaaaagaatttcacgtttctttccaagggtggaggtcaggcaaatgtacctaa
tcttttaaacactatgatggaactaagaaaatgctgcaatcatccataccttattaatgg
tgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagattt
tcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctgcc
aaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttgga
catactggaagactacctcattcaaagacggtacccatatgaacgaattgatggccgagt
aagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgatagatt
tgttttcctgctgtgtacaagggcaggaggcttgggcattaatcttactgctgctgatac
ctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagcacgatg
tcacagaataggacagagcaaatcagtgaaaatttacaggttgataacaaggaattctta
cgaaagagaaatgtttgacaaagctagcctgaagcttggccttgataaagctgtgctaca
atctatgagtggaagagaaaacgctacaaatggggtgcaacagctttctaagaaagaaat
agaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagatgaagggtc
aaagttttgtgaagaggatattgatcagattctcttaaggcgaacgcacacaattactat
tgaatctgaaggaaaaggctcaacgtttgcaaaggctagttttgttgcatctgggaacag
gacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaagctgagct
ggatatcgatgctttaaatggaaggaataacctagttattgatacaccaagaataagaaa
gcaaaccagactctacagtgcagtcaaagaggatgagctgatggagttttcagacctgga
aagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatcacaagg
ttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggctggggtcg
atggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagatgtgga
aaccatctgccggactatcctggtatattgtcttaatcattacaaaggggatgaaaatat
caaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagctttggt
taatcattccggtctgtctgcaccagtgcccagagggaggaaaggcaaaaaagtaaaagc
tcagagttcacagccaatgctgcaagacgccgattggctcaccacctgtaatccggatgt
attatttcaagaagacagctataggaaacatctcaaacatcactgtaacaaggtcctgct
gcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagacaagat
cttagagggtgctgactcaagtgaagtagatgtatggatacctgagcccttccatgctga
agttcctgcagactggtgggataaggaggcggataaatcccttttaattggagtattcaa
acacggttatgagaagtacaattcaatgagagctgatccagcactgtgctttctggaacg
ggtcggcatgcctgatgcgaaggccatagctgctgaacagagagggacagacatgttagc
agatggcggtgatggtggtgaatttgacagagaggatgaagatccagaatataagccaac
cagaactcctttcaaggatgagattgatgaatttgcaaactcacctccagaagacaaaga
ggagtccatggaaatacagacaaacaagcacagcgaaggcaatgctgagttaggccaact
ctactggcccaacacttcaaccctgactacccgtctgcgtcgtctcattactgcctatca
gcgcagctataaaaggcagcaaatgaggcaagaggcactaatgaagaccgaccgcaggag
acgtcggcctcgggaagaagtgagagcactagaagcagaaagggaagctataataactga
aaaacgacaaaagtggacaagaagagaagaagctgatttctaccgtgtggtgtctacttt
tggaattattttcgatcctgtaaaacatcagtttgactggaatcaattcagagcatttgc
caggcttgataaaaagtccgatgaaagcttggaaaagtattttaatggctttgtgaatat
gtgtagacgagtgtgccgaatgccagtcaaaccagatgatgaaccgcctgatctttccac
tatgattgagccgatcacggaangaagaactttatatcgcatagaactgttgcggaagat
ccgtgaacaggttctccatcacccacagttgggggagaggctaaaactttgccaaccaag
cttggacctgccggagtggtgggagtgtggtaaacatgacaaagacttactgattggtgc
tgctaaacatggagtcagtaggacagattatcatattctgaatgatccagaactctcttt
tcttgaggctcataaaaactttgctcaaaacagagggatgggtaatgcaattactgtctc
tgtaaaccctctgggtgctggctgcagtcaaacaccacctgttgtcccatccacaccagt
acaagaagaaaagactacagaacaaatggagtctaaagttgaagggtctgaaaatccagc
agccaaagaaaagactgagaacaaagaggagacagatattgcagataaggacactaaacc
ggactgtgatgcggaggctgagcctagctctgttaaatgtgaagtgaaagacatagaaat
gagtacagacgtagacccaaaatctatttctgagaaaggttcggaagaagatgaagagga
gaagctggatgatgatgataaatcagaagaatcctcacaacctgaagcaggatcagtttc
tcagggtaagaattttgatgaagaaagcaatgcctctatgagtaccgcaagggatgaaac
acgcgatggattctacatggaagatggggatccctctgtggttcagctgcttcatgagag
aacattcaccttctctttctggcctaaggaccgagtaatgatcaaccgattagacaacat
ctgtgaagcagtgctgaaagggaagtggccagtaaataggcgccagatgtttgatttcca
ggggctcatacctgggtatactccaacagctgtggacagccctctacaaaaaaggagctt
tgcagagctctccatggttggtcaagccggcgtcagcggcagtgaagatatcactgcttc
tcctcagttatcgaaggaagatgcactcaatttatcggttccacgtcagaggaggaggag
acgaagaaagattgaaattgaggctgagagagccgccaagaggagaaaccttatggaaat
ggttgcccagttacgtgagtctcaggtggtctccgaaaatggacaagaaaaggttgtaga
tttatcaaaggcctcacgagaggcaacaagttctacctcaaatttttcatctgttacttc
aaagtttatcttgcctaatgtctccacacctgtgtccgatgcctttaaaactcaaatgga
gctgctgcaagcagggctttcacgcacacccacgaggcatctactaaatggctctttaat
agatggagaaccacccatgaagagaaggagaggaaggaggaaaaatgtagaaggacttga
tctgttatttatgagcagcaaacggacatcattgactgtagaggatgcagaagtgaccaa
agcttttgaagaagatatggaaaccctaccagcaaggaacattccatctcctggtcaatt
ggacccagacactcgcatccctgtaatcaatctggaggatgggaccaggctggtgggaga
ggatgctcctaaaaataaggatttagttgaatggcttaaattgcatcctacttacactgt
agatatgccaagttatgtaccaaagagtgcagatgtgctgttttccccatttcagaagcc
gaaacaaaaacgacacagatgtcgaaaccccaataaactggatataaacactttgacagg
agaagaaagagtacctgttgtaaataaacgaaatggaaagaagatgggtggagctatggc
ccctccaatgaaggacttgccaagatggctggaagaaaatcctgaatttgctgttgctcc
agattggactgacattgttaaacagtctggttttgttccagagtccatgtttgaccgtct
tctcactggacctgttgtgagggaggaaggagcaagcagaagaggaagaaggccaaaaag
tgaaattgccaaagcagctgcagcagctgctgctgtagcatcaacttcgggaatcaaccc
actcctaatgaacagtctgtttgctggaatggacctcacaagcctccagaacctacagaa
cctgcagtctctccagctcgcaggcctcatgggcttcccgccagggctagcaacagctgc
tactgctgctgggggggacactaaaaatccggctgccatgttgcctctgatgttgccagg
gatggcaggactgcccaatatgtttggactaagcggattgttgaataacccgataacggc
tactactggaaatgccactactacttctggtcaaggagagactggggatggcacttcaaa
agctgaagagaagaaaaatgagaacgaagaggaaaacaaagactctgagaaaagcacaga
cactgtttctgctactgactctgcgaatggatctgtcagtgctgctactgcggcgnnggt
aaccactaccaccacgaccaacactggattgcccacaaaccctctggccttcaatccttt
cctgctgtctaccatggctcctggcctcttctatccatctatgtttctacctccaggact
gggaggattgactctgcccggtttcccagcactagcaggacttcagaacgcagtgggctc
caatgaagagaaggctactgacaaaactgaaggaactgcctttaaagatgaagaaaatct
cgaaggcagtgatgcagaggagagccttgataaaactgcaaattcctccgttttagaaga
tgaaatagcacagggtgaagaattagactcacttgatgggggggaagaaatagaaaacaa
tgaaaatgatgaataa
DBGET
integrated database retrieval system
