Cariama cristata (Red-legged seriema): 104162704
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Entry
104162704 CDS
T08341
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104162704 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccri04040
]
104162704 (TRPV1)
Ion channels [BR:
ccri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104162704 (TRPV1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
104162704
NCBI-ProteinID:
XP_009699808
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MSSILGKMKKFGSSDMEESEVTDEHTDGEDSMLEMPDSLQGTLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHANLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTRDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKTKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQPANITAEDSMGNMVLHTLVE
ISDNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIMILTAAAYYRPVEKEEKPPFTFGHSTGEY
FRATGEILSVLGGLYFFFRGIQYFVQRRPSFKTLIVDSYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNSSEYARCCHMKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITILDIENSYL
NCVRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGCSGDLRRNP
SYSIKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEVKLKPILEPYYEPEDSETLKESLP
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgggaagatgaagaaatttggcagttctgacatggaggaatctgaa
gtgacagatgaacacacggatggggaggactccatgctggaaatgcctgacagcctccag
ggtacactcagcaccaaggtgcagccacccaaaagcaacatctttgcaagacgcgggcgg
tttgtgatgggggatagtgacaaggacatggctcccatggattccttttaccagatggat
cacctgatggcaccttctgtcatcaaatttcatgccaatttggagagggggaaacttcac
aagctcctatctacagattcgatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaagggacctggatgatctgcta
ctctaccttaatagaaccttgaagcatctcacagatgatgagttcaaagagccagaaact
gggaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagag
tatactgacaactactacaagggccagactgcacttcatatcgccattgagagaaggaac
atgtacctcgtgaagcttttggtccagaacggagcagatgttcacgcaagagcctgtggg
gagttcttcaggaaaaccaaagggaaatctggcttttattttggggagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctccttgagaacccctaccag
ccagccaacatcaccgctgaggactccatgggcaatatggtcctgcacacactggtggaa
atttcagataatactaaggataataccaagtttgttaccaagatgtacaataacatattg
atccttggtgccaaaattaatccaatcctgaagctggaagaactcaccaacaagaaaggg
ctgactccattaactctggcagccaaaacagggaagatagggattttcgcatacatcctc
agacgagagatcaaagatcctgagtgcagacacttgtctaggaagttcaccgaatgggct
tatggacctgtccactcatctctttatgacctatcctgtatagacacgtgtgagaaaaat
tcagtgcttgagattattgcctacagtagtgaaactccaaaccgtcatgagatgctgctg
gtggaaccccttaacaggctgctgcaagacaagtgggaccggtttgtcaaacacttattt
tacttcaacttctttgtctataccatgcatatcatgatcctcactgcagctgcttactac
agacctgtagaaaaagaggaaaagcctccctttacatttggtcacagcactggggaatat
tttcgagcaactggagagatcctgagtgtattgggaggtctctattttttcttcagaggg
atacagtatttcgtgcagaggcgcccatcattcaagacgctgatagttgacagctacagt
gaggttcttttctttgttcactccttgctcctcctgagctctgtggtgctgtacttctgt
ggccaggaactgtacgtggcttccatggtcttctccttggcgctgggctgggctaacatg
ctgtactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtatatctagtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaatgaggggcaagacacaaatagctctgaa
tatgcccgatgctgccatatgaaacgaggccgcacatcctacaatagtctgtattatacc
tgcttggagcttttcaagttcactattgggatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatccttttggttctctatgtcatccttacatacatcctc
ctgctcaacatgcttattgcactgatgggggaaactgtgagcaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcttggatattgaaaacagctacttg
aactgtgtgaggcgctcgttccggtctgggaagcaagtcctggtgggcatcacacctgac
ggccaagatgattacagatggtgctttagggttgatgaagtgaactggtccacatggaat
actaatctgggcataatcaatgaagaccctgggtgctctggggacctcagacgaaatccc
agttactctattaagcctggcagagtttcagggaaaaactggaaaacgttggttccgctt
ttaagagatggaagcaggagagaagagactcaaaaattaccagaagaagtcaaattaaaa
cctattttggaaccttattatgagccagaagattctgagacattgaaggagtcacttcca
aagtcagtctaa
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