Cariama cristata (Red-legged seriema): 104164017
Help
Entry
104164017 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri02010
ABC transporters
ccri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104164017
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104164017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccri02000
]
104164017
Transporters [BR:
ccri02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104164017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
104164017
NCBI-ProteinID:
XP_009701513
LinkDB
All DBs
Position
Unknown
AA seq
2259 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPXXXXXTQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDTSI
KDVQKVLGKLRKLGNSSGSDLKLRDFLADNETFSDFLHHNVSMPSSAVEELLNAEVNLQQ
VIVSGYRMRLRDLCNSSTLSEFLTIQNQTVAIDSEAFICTLPKEKLHAAERAFRANLNPL
KPLQRRLSFNSSLQDLSETVEALRASLGKLVKELLSMKSWSDMRQEVMFLTNVNASSSST
QIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCNEL
MKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKIMTEVNRTFQELGVFRDLEGMWEE
ISPKIWTFMESSQEMDLIRTLLKGKALWDQHLPASNWTVEDVARFLSNHPEDLEAANGSV
YTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVLLINKSLELLDERRFWAGIVFTEI
APNSIELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVE
QAIIRVQTGTEKTTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVY
EKEARLKETMRIMGVDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFVF
LSIFGIVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFASL
LSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMTWY
IESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGPSEVCKEEEPVHLSLGVSI
QNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILG
KDICSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMDVGL
PHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGR
TIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSC
RNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDIGH
ELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETS
DGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMKGW
KLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQPW
MYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQREWTTASVP
DSVLDIFSKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQLEQDTADILQNLTG
RNISDYLVKTYVQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKKIL
ELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQGK
NPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVS
KAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALLL
FLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDI
LKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVV
FFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKIYR
MKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNIQ
EVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKYA
GNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSH
SMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEDFFGHA
FPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAK
DQSDDDHTKDLSLHKNQTVVDIAILNSFLQDENVKESCV
NT seq
6780 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggattgctgctatggaagaacttcacctacagaagaaga
caaactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagct
atgcctnntnnnnnnnnnnggacacaggggatcatctgcaatgccaacaacccttgtttc
cgctacccaacacctggggaatctcctggtattgttggaaacttcaatgcctccattgtt
tcccgcctgttctcagatgccaagaggttactcctgtacagccaacaggacacgagcata
aaggatgttcagaaggtcctgggaaaactgcgcaagttgggaaactcctctggctcagac
ttgaaacttcgggatttcctggctgacaatgagacattctcagacttcctccatcataat
gtgtccatgccatcatctgcagtagaggagctactgaatgcagaggtcaacctccagcag
gtcattgtgtctggttaccgaatgcgactgcgagatctctgcaatagctcaacactgtct
gagtttcttacaatccaaaatcagacagtggccatagactctgaagccttcatttgcacc
ttgccaaaggaaaaactccatgcagccgaacgagccttccgtgctaacctgaatcctttg
aagccccttcagagacgactttctttcaattcctccttgcaggatctgtcagaaactgtg
gaagctttgagagcgagccttgggaagcttgttaaagagttgctgagcatgaagagctgg
agcgacatgaggcaagaagtgatgttcctgaccaacgtgaatgcctctagctcttctaca
caaatctaccaggctgtgtcacgcattgtgtgtggccatcccgaaggtggagggctcaaa
attaaatccctcaactggtatgaggataacaattacaaagcactgttcggaggcaacagc
actgaagacgatgtaactaatttctatgataactccacaacaccctactgcaatgagctg
atgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaacccttg
ctgattgggaagatcttgtacactccagacacaccagccataaggaagattatgactgag
gtgaacaggacgttccaggagctgggtgtgtttcgtgacctcgaggggatgtgggaagag
ataagcccgaagatttggacgtttatggaaagtagtcaggaaatggatctcattcggacg
ctgctgaaaggcaaagctctctgggaccagcacttgccggcttccaactggacagtggag
gacgttgctcgtttcctgtcaaaccatccggaggacttggaggcagcaaatggctcagtg
tatacctgggtggacgccttcaatgagacagaccgggctatccagaccatctcccgcttc
atggagtgtgtcaacttggacaagctggagcctgtggccacagaagtcctgcttataaac
aagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcacagaaata
gctcctaatagcatagagctacctcagcatgtgaaatataaaatacgcatggacatcgat
aatgtagaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgtgctgac
ccctttgaggacatgcgctatgtttggggaggttttgcctacctgcaggatgtggtggaa
caggccatcatcagggtgcagacaggcacagagaagacaacaggagtttatgtgcaacag
atgccctacccgtgttatgtggatgacatatttctacgtgtcatgagccgctccatgcct
ctcttcatgactctagcctggatctactcagtggctgtgataattaagggcattgtgtat
gagaaggaagcccggctgaaggagacgatgaggatcatgggagttgacaatggcatcctt
tggctaagctggttcattagcagcctcatccctctcctgatgagcgcaggcctgctggtg
ctcatccttaagatggggaatctgctgccttacagtgaccctagcgtggtgtttgttttc
ctctcgatcttcggtattgtgaccatcctccagtgcttcctcatcagcaccgtgttctcc
agggccaacctggcagctgcctgtgggggcattgtctatttcacactgtacctgccttac
gtgctgtgcgttgcctggcaggactatgtcagcttctcactcaagatctttgcgagcctg
ctgtctccagtagcctttggctttggttgtgagtactttgcactgttcgaggagcaggga
gttggtgttcagtgggacaacttctttgagagcccattggaagaagatggctttagcatc
accacatctgctgtcatgatgttgtttgacaccttcctatatggggtcatgacctggtac
attgagtctgtcttcccaggccagtatgggattcccaggccctggtactttcctttcacg
aagtcctattggtttggtgaggaaccgcaggacaggcagcacccgcatcctgaccagaag
gggccttcagaagtctgcaaggaggaagagcctgtgcacctgagccttggtgtttccatc
cagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctcacactg
aacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaaaccact
accatgtccatcttgactggtttgttccccccaacctcgggtacagccttcatcctgggg
aaagatatctgctctgagctcagcaccatcaggcagaacctgggtgtctgtccacaacac
aatgtgctgtttgacttgctgactgtggaggaacacatctggttctatgctcggctcaaa
gggctgccagaaaagaaggtgaaagaggagatggagcagatggcaatggatgttggtttg
cctcacaaactgaaagctaggacaagcaaactgtctggtggcatgcagaggaagctctcg
gttgccttagcctttgttggtggctccaaggttgtcattctggatgagcctacggctggg
gtggatccttattcacgcagagggatatgggagttgctcctgaagtatcggcaaggccgc
actatcattctctccacgcaccacatggatgaggcagacattctgggggaccgaattgcc
atcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaaccagctg
ggaaccggctattatttgaccctagtcaagaaggatgtggattcctctctgagctcctgc
cgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccagagcagc
tctgacgctggccttggtagtgaccatgaaagtgacacactgacaatagatgtctctgca
atttcaaatctcattacaaaacacgttcctgaagccaggctggtggaggacattggacat
gaattaacctatgtcttaccgtacaaggctgctaaagagggagctttcgtggagctgttc
catgaaattgatgaccgtctctctgatcttggcatctccagctatggcatctctgaaacc
accctggaagagatcttcctgaaagtggctgatgatagcggtgtggatgcagaaacctca
gatgggacattgccagccagaaggaacagacgagtgtttggagacagacagagctgcctt
cgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatccagaatcc
agagagacagaccttctcagtggcatggatgggaaaggctcctaccagatgaagggctgg
aagctcacccagcagcagttcatggctctgttatggaagaggctgcttattgccaagaga
agccggaagggcttctttgctcagattgtgctgccagctgtctttgtgtgtattgctctc
atgttcagcctgattgttcctccctttgggaagtatcccagcctggaattacagccctgg
atgtatgatgagcagtacacttttattagcaatgatgctccagaagatgcaggcactcag
agacttttggatgcccttctcaataagcctggttttgggacacgctgtatgcagggacac
tccatcccagacactccttgcactgtgggacagagggaatggactactgcttcagtccca
gactcagtcttggacatcttctcgaaaggcaactggagcatggaaaacccttccccatct
tgtgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccccctggtgcaggt
gggctgccacccccacagctcgagcaagacactgctgacatcctccagaatctgacaggc
cgcaatatatcagactacctagtgaagacctatgtgcagatcattgggaaaagcttaaag
aataagatctgggtgaatgaattcaggtatggtggcttttccttgggtgccagcagttcc
ctcatgcttcctccaagccatgaagtcactgatgccattaaacaggtgaagaaaatcttg
gagctagcacaggggagttctggagatcggtttctcaacagtttgtcaagctttatgaaa
ggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggctggcatgccatc
gcctccttcctgaatgtgatcaacaatgccatccttcgggccaacctgcagcagggcaaa
aaccctagtgcttacgggatcactgctttcaatcacccactcaacctcaccaagcaacag
ctctctgaagtggccctgatgaccacctctgtggatgtcctagtctccatctgtgtgatc
tttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaacgtgttagc
aaggctaaacacttgcagttcatcagtggtgtgaagcctgtaatctactggctggccaac
tttgtctgggatatgtgcaactacattgttccagccacactagtcatcatcatcttcatc
tgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctggctctccttctg
ttcctctacgggtggtccatcacccctctcatgtatccagcctcctttgtgttcaaaatc
cccagcacagcatatgttgtgctgaccagcgtgaacctcttcattggcattaatggtagc
gtggccacctttgtcctggagctcttcaccaacaacaagctgaacaacatcaacgacatc
ctgaagtctgtcttcctcatctttccgcacttctgcctggggcgaggactcattgacatg
gtgaaaaaccaggccatggctgatgctctggagaggtttggagaaaatcgttttgtgtct
cctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagagggcgttgtc
ttcttcctcatcacagtgctcatccagtacaggttcttcatcaaacccaggccggtctat
gccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagggagagacagaggata
attagtggaggaggacagagtgacatcttggaaatcaaggagctaaccaagatttaccga
atgaagcgaaagccagcagttgataggatctgtgttggaattccccctggagagtgcttt
ggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaactggtgat
acagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttgtccaacatccaa
gaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaactgctgaca
gggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaagaagtctgc
aaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaaaaatatgct
gggaattacagtggagggaacaggcgcaagctctccacagccattgccctcattggaggg
ccacctgtggtattcctggatgagccaacaacagggatggatcccaaagcacgtcgcttc
ttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtgctcacatctcac
agcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaatgggcgattc
aggtgtctgggcagcgtccagcatctaaagaacaggtttggagacggttataccatagtg
gtgagaattgcaggggcaaacccagacctgaagcctgttgaggacttctttgggcatgcc
ttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccagcttccctct
tcaccatcctccctagccagaatattcagtattctctcccagaacaaaaagagactccac
atagaagactactccgtttctcagaccacacttgaccaagtatttgtaaattttgctaag
gaccaaagtgacgacgaccacactaaggacctgtcattgcacaaaaaccagactgtggta
gacattgcaatccttaattccttcctgcaagatgagaatgtaaaagaaagttgtgtgtga
DBGET
integrated database retrieval system
