Cariama cristata (Red-legged seriema): 104164124
Help
Entry
104164124 CDS
T08341
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03030
DNA replication
ccri03420
Nucleotide excision repair
ccri03430
Mismatch repair
ccri03440
Homologous recombination
ccri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104164124 (RPA1)
03420 Nucleotide excision repair
104164124 (RPA1)
03430 Mismatch repair
104164124 (RPA1)
03440 Homologous recombination
104164124 (RPA1)
03460 Fanconi anemia pathway
104164124 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccri03000
]
104164124 (RPA1)
03032 DNA replication proteins [BR:
ccri03032
]
104164124 (RPA1)
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104164124 (RPA1)
Transcription factors [BR:
ccri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104164124 (RPA1)
DNA replication proteins [BR:
ccri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104164124 (RPA1)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104164124 (RPA1)
MMR (mismatch excision repair)
104164124 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104164124 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
104164124
NCBI-ProteinID:
XP_009701661
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MKGEDVVKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNYLVEEERLSAQ
CICEVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEGQGQQRSLAPAANP
APSKPQQQSGNLPVAGKSPAAPKYHAPSNQFGKASAPSLVKTPGGSQAKVVPIASLNPYQ
SKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKV
YYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAKHLPSVQFEFVSISDLENTPKD
SIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDASGKMVTATLWGNEAEQFDGSRQP
VIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGP
ASGVNTNWKTLFEVKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQ
NGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQNAAFLGELKEKN
EQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLIASIRRNA
QLG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggaggacgtcgtcaagcccgtgctgcaggtcatcaatacacgggctattgca
actggaaatgggccaccacgttaccgagtgttgatgagtgatggggttaacacactctcc
tcattcatgttggcaacacaactaaactatctggtggaagaggaacgcttatcagcccaa
tgtatttgtgaagttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatttaaatgttctgaaaactgctgataaggttggtggaaatattggcaat
ccagtgccgtacaatgaagggcaagggcagcaacgttctttagctccagcagcaaaccca
gcacccagcaaaccacagcaacaaagtggcaatttgccagtggcaggtaagagtcctgct
gctccgaagtaccatgctccctcaaaccagtttggaaaagcgagcgctcccagcttggtg
aagacaccagggggatcacaggctaaagtagtaccgattgccagcttgaacccataccaa
tctaagtggaccatttgtgctcgtgttacccaaaaaggccagattcgcacatggagcaac
tctcgtggtgaaggaaagctcttttctatagagctagttgatgaaagcggtgagattaga
gctactgcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggta
tattattttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaat
gactatgagattacattcactaatgagacttcagttgtgccctgtgatgatgccaagcat
cttccatctgttcagtttgagtttgtatccatctctgacttggagaacacaccgaaagac
tcaattgttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtg
aaagctaacaatagggaggtatcgaagaggaacgtgcatctgatggatgcatcagggaaa
atggtgacagctacgctatggggaaatgaggccgaacagtttgatggttctagacaacct
gtgatagccatcaaaggagcccgagtctctgactttggtggtagaagcctgtctgtcctg
tcctccagtacagttgtcatcaaccccgatagcccagaggcttttaagctccgaggatgg
tttgactctgaggggcagcttctggaatgtgcctcaatctctgatgtgaggggtgggcca
gcatctggagtgaataccaattggaaaactttgtttgaagtcaaatctgagaacttggga
caaggagataaggcggattattttagctgtgtgggcacagttgtacatctgcgcaaggag
aactgtatgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaa
aatggactgtaccgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatg
atgcttctggtgaccattgcagattgtctagagtatcagtgggtgacttgtttccaagaa
tcggcagaattcattcttgggcaaaatgcagctttcctgggagaactgaaggaaaagaac
gagcaggcatttgaagaagtgttccaaaatgcaaacttcaacacgtacgagttcaggatc
cgagtaaaactggagacttacaatgatgagtctcgtattaaggctacagcagtggatgtc
aaacctgtgaactacagagaatacagcaagaggttgatcgcaagcatcaggagaaatgct
caactagggtga
DBGET
integrated database retrieval system
