KEGG   Cariama cristata (Red-legged seriema): 104164324
Entry
104164324         CDS       T08341                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ccri  Cariama cristata (Red-legged seriema)
Pathway
ccri03030  DNA replication
ccri03410  Base excision repair
ccri03420  Nucleotide excision repair
ccri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104164324 (RFC2)
   03410 Base excision repair
    104164324 (RFC2)
   03420 Nucleotide excision repair
    104164324 (RFC2)
   03430 Mismatch repair
    104164324 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccri03032]
    104164324 (RFC2)
   03036 Chromosome and associated proteins [BR:ccri03036]
    104164324 (RFC2)
   03400 DNA repair and recombination proteins [BR:ccri03400]
    104164324 (RFC2)
DNA replication proteins [BR:ccri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104164324 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104164324 (RFC2)
Chromosome and associated proteins [BR:ccri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104164324 (RFC2)
DNA repair and recombination proteins [BR:ccri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104164324 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104164324 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_24 AAA_11 AAA_assoc_2 DNAX_ATPase_lid AAA_19 MipZ nSTAND3 AAA_18 AAA_5 AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 RuvB_N NTPase_1 MeaB RNA_helicase SLFN-g3_helicase Rad17 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 104164324
NCBI-ProteinID: XP_009701917
LinkDB
Position
Unknown
AA seq 310 aa
MKLSEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTYQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARL
CQKTAVPAAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaactatctgaaatagttggaaatgaagatacagtgagcaggttggaggtctttgca
aaagaggggaacgtaccaaatattataattgctggtcccccaggaacaggtaaaaccacc
agtatcttgtgcttggctcgtgctctgcttggtcctgcattaaaagatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgttgtgagaaacaaaatcaaaatgtttgcc
cagcaaaaggtcacacttccaaaaggtcggcataaaataatcatccttgatgaagcagac
agcatgacagatggagcacagcaagcattgagaagaacaatggaaatttattccaaaaca
acgcgcttcgcacttgcctgcaatgcctctgacaaaatcatagaacctattcaatcccgg
tgtgcagtgctgcgttacaccaagctgacagattcacaaatccttgcaaggctactgaaa
attgttgagaaagaggatgtaccatatacagatgatggactagaagccattatcttcaca
gcccaaggagatatgagacaggcattaaacaacttacagtccacctattctggatttggc
tttataaacagtgaaaatgtctttaaggtatgtgatgagcctcatcctctgcttgtgaaa
gaaatgatacaacactgcataaatgcaaatattgatgaagcgtacaagattcttgcccac
ctgtggcgacttggatactctccagaagatgtgattggcaacatcttccgtgtatgtaaa
acctatcaaatgccagaatatctgaaactggaatttatcaaggaaattgggtacactcac
atgaagatagcagaaggtgtgaactcacttttacaaatggccggactgctggccaggctg
tgtcagaagacggcggtccctgcagcaagttag

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