Cariama cristata (Red-legged seriema): 104164486
Help
Entry
104164486 CDS
T08341
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ccri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
104164486 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104164486 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccri02000
]
104164486 (NPC1)
Transporters [BR:
ccri02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
104164486 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
104164486
NCBI-ProteinID:
XP_009702127
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MAQFKQGQVLPQLCVWYGECGVASGDKRYNCAYDGPPIALPEDGYDLMQELCPGLFFGNV
STCCDVHQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTCSPNQSDFLNVTNTIPYYD
PILKENKSSITELQYFIGERFANAMYNACKDVEAPSSNVKALGLLCGKDVKDCNATNWIE
YMFSKDNGQTPFSIIPVFSDVPVYGMNPMNNATKGCNESMDDSTGPCSCQDCSIVCGPKP
NPPPLPAPWLLFGLDAVYVIMWISYMGFLLIFFALIFGVWCYRRQHFVSEYTPIDSNIAL
SVNSHRDNGKITCGEKLGERFENGLRMTFTSWGAFCVRNPRPVILFSVVFIAMCCSGFVY
VKATTNPVDLWSAPSSQARREKEYFDAHFGPFFRTEQLIIQAPNSHPDTYSPYPSGADVP
FGPPLTKDILHQVLDLQDAIVNITASFDNETVMLKDICLAPLAPYNNNCTILSVLNYFQN
SHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGY
DDDNYNNATALVITFPVNNYYNDSRKLMKALAWEKEFITFLKNYDNPNLTISFSAERSIE
DEINRESNSDVGTVLISYIVMFLYISIALGHIQSCKKLLVDSKISLGIAGILIVLSSVAC
SIGIFSYFGIPVTLIVIEVIPFLVLAIGVDNIFIIVQTLQRDERLQGETLDKQIGRVLGD
VAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDFILQVTCFVSLLGLDIKRQ
ERNRLDILCCIKSSEETSGVQRSESILFLFFKNLYSPCLLKDWMRPIVVAVFVGVLSFST
AVMHNVEIGLDQSLSMPDDSYVIDYFSQVNKYLHTGPPVYFVLEEGHNYTSLEGQNMVCG
GMGCNNDSLVQQVFNAAEIGSYTRIGYAPSSWIDDYFDWVKPQSSCCRVYNTTGQFCNAS
VTDPSCTRCRPLTQEGKQRPQGKDFMTFLPMFLSDNPNPKCGKGGHAAYSSAVNFINNKS
DVGATYFMTYHTVLKTSSDFIDAMKKARIIADNITETMGIKEKNYRVFPYSVFYVFYEQY
LTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAIVVSITIAMIIINMFGVMWLWGISLNA
VSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEALSHMGSSVFSGITLTKFGGIV
VLAFSKSQIFKIFYFRMYLAMVLLGATHGLVFLPVLLSYIGPSVNKAKTRAAQERTRGTE
RERLLYF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggcccaattcaaacagggtcaggtacttccacaactgtgtgtctggtatggagaatgt
ggagttgcttctggagacaagagatataactgtgcttatgatggaccaccaatagcacta
ccagaagatggctatgacttaatgcaggaactctgtccgggtttattcttcggcaatgtt
agcacttgctgtgatgttcatcagcttcagactttgaaaaacaacttgcagttgcctctg
cagtttctttccagatgtccatcatgtttttacaacttgataaacctcttctgtgaactg
acttgcagtccaaatcagtctgactttttgaatgttacaaacaccataccttattatgat
ccaattttaaaagagaacaaaagtagcattacagagctgcagtactttattggagaacgc
tttgcaaatgcaatgtataatgcctgcaaagatgtggaggctccatcaagtaatgttaaa
gcgctggggctcctgtgtgggaaggatgtcaaggactgcaatgcaaccaactggattgag
tacatgtttagtaaggataatggacaaactcctttcagtattattcctgtcttttcagat
gttcctgtctatggaatgaatcctatgaacaatgctaccaaaggctgtaatgagtctatg
gatgattcgacaggaccatgcagctgtcaggactgttcgattgtttgtggtccaaaacct
aacccccctccattgcctgctccttggcttttgtttggtttggatgctgtgtatgtcatc
atgtggatttcctacatgggatttctactcatattttttgcactgatttttggagtctgg
tgttacaggaggcagcactttgtctcagagtacacaccaattgacagcaatatagccttg
tctgtgaattcccatcgtgacaatgggaaaattacctgtggtgaaaagcttggtgaaagg
tttgagaatggcctaaggatgacattcacatcatggggggctttctgtgtcagaaatcca
cgtcctgttatcctcttctctgtggtcttcatagcaatgtgctgctcaggtttcgtatat
gttaaagcaactacaaaccctgtagatctctggtcagccccaagcagccaagctcgcagg
gagaaggagtactttgacgcacactttgggcctttctttcggactgaacaactgattatt
caagcaccaaacagccatccagacacctattcaccttacccatcaggagcagatgtacct
tttgggcctccacttaccaaagacattctccatcaggtactggatttgcaggatgctatt
gtcaacataactgcttcttttgacaatgagactgtaatgctgaaagacatttgcctggct
cctcttgctccctacaacaacaactgcactattctaagtgtactcaactactttcagaac
agtcattctgttctagatcacactgttggggatgagttctttgtctatgctgactaccac
actcacttcttatattgtgttcgggctccagcatcactgaatgacacaagcttgcttcac
gatccctgcttaggaacatttggtggacctgtatttccatggctggtgttgggaggatat
gatgatgataactataataatgctacagctcttgttattacttttcctgtgaacaactac
tacaatgactcaagaaagctaatgaaagccttggcatgggaaaaagagtttattaccttt
ttgaagaactatgataatccaaacttaactatatcattttctgctgaacggagtattgaa
gatgaaatcaatcgtgaaagcaacagtgatgttggcactgtgttgataagctatattgta
atgtttctatacatctccatagctttgggacatatccagagctgtaaaaaactgctggtg
gattcgaagatctcccttggcattgcaggcatcctgattgtactgagctcagtggcatgt
tctataggcattttcagctattttggaatcccagtgacgctgattgtgatagaagtaatc
cccttcttggtgctggctattggagtggacaacattttcattatagtccagacacttcag
agagatgagcgccttcaaggtgaaactctggataaacagattggcagagtcttgggagat
gtggcacccagtatgtttctctcgtctttttcggagactgtggcattctttcttgggaca
ctgtctacgatgccagcggttcgcacattctccctttttgctggaatggctgtgctcata
gactttattcttcaagtcacttgctttgtaagtctcctgggcttggatattaagcgtcaa
gagaggaatagactggatattctgtgttgcatcaaaagcagtgaagaaacgagtggagtc
cagcgttctgagagcatcttatttctgttcttcaaaaatctgtattctccatgcctgctt
aaggattggatgagaccaatagtggtggcagtgtttgtgggagttctgtcattcagtaca
gcagttatgcataatgtagagattggactggatcagtctctctcaatgccagatgactcc
tatgtaatagattacttcagccaagtcaacaagtacttgcataccggtcctcctgtctac
tttgtcctagaagaagggcacaactacacctctttggaagggcagaacatggtgtgtggt
ggaatgggatgtaataatgattcacttgtccagcaagtcttcaatgctgcagaaattggt
agctacacgaggataggctatgccccatcatcctggattgatgactactttgactgggtg
aagccacagtcatcctgttgcagagtctacaataccactggacagttttgcaatgcttca
gtcaccgatccatcctgcactcgttgtcgaccactaactcaagaaggcaagcagagaccg
cagggcaaagacttcatgacatttttaccaatgttcctatcggacaaccctaatccaaaa
tgtggcaaaggaggacatgctgcatatagctctgctgtcaacttcataaacaacaaatct
gatgttggagctacgtattttatgacttaccatactgtactgaaaacatcatctgatttt
attgatgctatgaagaaagctcggattatagcagataacattactgaaaccatgggcatc
aaagagaagaactaccgggtgtttccttacagtgtgttttatgtcttctacgaacaatac
ttgacaattgtgcatgatgctatcttcaacctctgcatctccttgggatcaatatttttg
gtgacaactgtgctgcttggttttgaagtatgggcggctattgtggtttcaataactatt
gctatgataatcatcaacatgtttggagtgatgtggctctggggcatcagcttgaatgcg
gtttcattagtaaatctcgtcatgagttgtggtattgctgtggaattctgcagtcacgtg
acaagagcgttcactgttagcactaagggcagtagagtagagcgtgcagaagaagctctg
tctcacatgggcagttccgttttcagtggtatcacactgaccaaatttggaggaattgta
gtactggctttttccaaatctcagatcttcaagatattctacttcaggatgtatctagct
atggttctgctaggagcaacacatggactagtatttcttcccgttctgcttagttacata
ggtccatcagtaaataaagctaaaactcgtgctgcacaagaaaggaccagaggtacggaa
cgggagagactcctctacttttag
DBGET
integrated database retrieval system