Cariama cristata (Red-legged seriema): 104164534
Help
Entry
104164534 CDS
T08341
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104164534 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104164534 (DHX15)
03009 Ribosome biogenesis [BR:
ccri03009
]
104164534 (DHX15)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104164534 (DHX15)
Spliceosome [BR:
ccri03041
]
Complex A
U2 snRNP components
U2 related factors
104164534 (DHX15)
Complex B
104164534 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104164534 (DHX15)
Ribosome biogenesis [BR:
ccri03009
]
Eukaryotic type
90S particles
Helicases
104164534 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
104164534
NCBI-ProteinID:
XP_009702188
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MQVSHFLLCLLTHFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRSSSNSAYY
AAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVL
VGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVG
YSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKE
VVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRT
VIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQ
RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV
TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG
IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS
CDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSL
EDDELNYGDNRFECLW
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtatctcattttctgctatgtctcttaactcattttaggaaagatcgtgaccgg
gacagggaccgtgatgaccgttctaaagatcgtgacagggatcgtgacagagatagagat
cgcgacagagaaagggacaaggaaaaagatttgcgatcttcatctaactctgcatattat
gcggctgctgggttaccaactataaaaccagcaatgattccacacagtatcaaccctttc
acaaatctaccacatacaccacgatattacgacatcctgaaaaaaaggctacaacttcct
gtctgggaatataaagaaagatttacagatattttgattaggcatcagtcatttgtgctg
gtcggtgagactggatctggtaaaacaacacagatccctcaatggtgcgttgactacatg
cgctcattacctggaccaaagaggggagtagcatgtacccagcctaggagagtagctgca
atgagtgttgcacagcgggttgctgatgagatggatgtcatgctgggccaggaggttggt
tattctattcgatttgaagactgcagtagtgcaaaaaccattttgaagtatatgactgat
ggtatgttacttcgtgaagcaatgaatgatcctttgctggagcgctatggtgttataatt
cttgatgaggcccatgagaggacactggctactgatattttgatgggagttttgaaggaa
gttgtaagacaaagatctgatttgaaggttatagttatgagtgctactttagatgctggc
aagtttcagatctattttgataattgtcctcttctaactatcccgggtcgcacgcatcct
gtggagatattctatactccagaaccagaaagggattaccttgaggctgccattcgaacc
gtgatccaaattcacatgtgtgaagaagaggaaggagatctcttactctttcttactgga
caggaggagattgatgaagcctgcaagaggataaaacgtgaaattgatgatttaggccct
gaagttggtgacatcaaaatcattccattatattccacccttcctccacagcaacagcaa
aggatttttgaacctcccccaccaaaaaaacaaaacggagcaataggaagaaaggttgtt
gtgtccactaatattgctgagacatcattaacaatagatggtgttgtgtttgtgattgat
cctggctttgcaaaacagaaggtatacaatcctcgtatcagagtggagtctctcttggtg
actgcaattagtaaagcttctgctcagcagcgagctggccgtgctggtcgtactagaccg
ggcaagtgcttcaggctttatacagagaaggcttacaaaactgaaatgcaggacaacaca
taccctgaaattttgaggtctaacttaggatctgtagtattgcagctgaagaagcttggt
atagatgatttggtgcactttgattttatggatcctccagctccagaaacactgatgaga
gccttagagcttttgaattatctggctgctttaaatgatgatggagacttgactgagttg
ggatccatgatggctgaatttccattggacccgcaactggctaaaatggttattgcaagt
tgtgactacaactgttctaatgaggtcctatctattactgccatgttgtcagtcccacag
tgttttgttcgccccacggaagcaaagaaagcagcagatgaagccaagatgaggtttgcc
cacatagatggagatcatttgacgttgctgaatgtctaccatgctttcaaacaaagtttg
gaagatgatgagcttaattatggtgacaataggtttgagtgtttatgg
DBGET
integrated database retrieval system
