Cariama cristata (Red-legged seriema): 104164568
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Entry
104164568 CDS
T08341
Symbol
DDX20
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104164568 (DDX20)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104164568 (DDX20)
Spliceosome [BR:
ccri03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104164568 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
SiaC
CMS1
Motif
Other DBs
NCBI-GeneID:
104164568
NCBI-ProteinID:
XP_009702232
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
ILILAPTREIAVQIHAVITTIGLKMEGLECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIK
QLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPTNKQMLAVSATYPESLAN
ALTRYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQA
LVFSNLHSRAQHLAEILXXXXXAECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGI
DAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENTMMKIAQKCNLQL
LPLPEPIPPGMMDQFEDGEVEVKPVIHTGASVNSDTVCLRPEEPVLQPVQNSFSEVPQSL
CNLPGDNSSVERPKKAVKQKQIKKCTNSANTEKDSRNPQTSSCHTEQRNRVKSVSRTDGQ
CNARAPDEEALKKNLPRIPCLSSFKKQPNNPWSFSEFVEDYEYFIKEGMEREVEILRSYS
GPRDQCEFPRNHGEEWKEVEHNTEAVANGGVSGDSDGSYSSRPSSNSRENNLCFEAFSDT
QEKNAVPTVCQGHTGFCRIPEKLQELSQVPKQNQVKKKVLKQNTKQKKRHHHQFASPSTG
KTEDDCSCSSWDDGVACEAWSYKNYWKSYYQAWQNYYAAMSHYRKSYRQFNWMNAYHVNS
VYLQELLKSGD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
attctgatcctggctcctacgcgagagattgctgtgcagattcatgctgtaatcacaact
attggactaaaaatggaaggcttggaatgccatgttttcattggagggactcctttgaac
caggacaaaataagactaaagaagtgccacatagcagttggctccccaggtcgaataaaa
cagctcatagagttggactacttgaatacagccagtatccggcttttcattcttgatgaa
gcggacaagcttctagaagagggcagctttcaggaacaaatcaattggatttactcttca
ctaccaaccaataaacagatgcttgctgtttcagctacttaccctgaatcattagctaat
gctttgaccaggtacatgagagagccaacatttgtgaggttgaaccctactgatccaagt
cttattgggctgaagcagtattacaaaattgtgaattcccatccacttccccataaaaca
tttgaggaaaaaacccagcatctacaggagttgttcagcaagattccatttaatcaagcc
ttagtcttctcaaatttgcatagcagggctcaacatctagctgaaatactnnnnnnnnnn
nnnnctgctgagtgcatttcaggcagcatgaatcaaaatcaacgacttgatgctatggct
aaattaaagcaattccactgtagagttctgatttccacagacttgacctctcgtggaatt
gatgctgaaaaagtgaatctggttatcaacctggatgtacctgtagactgggaaacgtac
atgcatcgcattggcagagctgggcgctttggaactttaggcttatctgtgacatactgc
tgccgtggagaagaagaaaacacaatgatgaaaattgctcagaagtgtaatcttcagctt
cttcctctaccagagcctatacctcctggaatgatggatcaatttgaagatggggaggta
gaagtcaaacctgttatacatacaggtgcttcagtgaattctgacactgtgtgtcttaga
ccagaggaaccagtgctgcagcctgtccaaaatagtttttcagaggtacctcagtctctt
tgtaatcttccaggtgataattcttctgtagaaaggccaaaaaaggctgtgaagcaaaag
cagataaaaaagtgcacaaattctgcaaataccgaaaaagatagtagaaacccccaaact
tccagttgccacacagaacagaggaatcgagtcaaaagtgtctccagaacagatggacaa
tgtaacgctcgggctccagatgaggaggccttaaaaaaaaatcttcccagaattccgtgc
ttgtcttctttcaaaaaacaaccaaacaatccctggagcttctcagagtttgttgaagac
tatgagtatttcattaaagaagggatggagagagaggttgaaattttaagaagctattca
ggcccaagagaccaatgtgagttccccagaaatcacggtgaagagtggaaagaggtggaa
cataatacagaggcagtagcaaatggtggtgtgtctggtgacagtgatggttcgtacagt
tccaggccttcctccaatagtagggaaaataacttatgctttgaagcattttcagataca
caggagaagaatgctgttcccacagtctgtcagggtcatacggggttttgtcgtatacca
gagaaacttcaggagctatcacaagttccaaagcaaaatcaagtgaaaaagaaagttctg
aaacaaaacactaaacagaagaaaaggcatcaccatcagttcgctagtccttccacagga
aaaactgaagacgactgctcctgcagctcttgggatgatggtgttgcatgtgaggcttgg
agttacaaaaactactggaaatcttattaccaggcatggcaaaactactatgctgctatg
tctcactataggaaaagttatagacagtttaactggatgaatgcctatcatgtcaactca
gtctatcttcaggagctgctgaaaagtggcgattga
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