Cariama cristata (Red-legged seriema): 104164588
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Entry
104164588 CDS
T08341
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03020
RNA polymerase
ccri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104164588 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104164588 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccri03021
]
104164588 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ccri03400
]
104164588 (POLR2B)
Enzymes [BR:
ccri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104164588 (POLR2B)
Transcription machinery [BR:
ccri03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104164588 (POLR2B)
DNA repair and recombination proteins [BR:
ccri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104164588 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104164588
NCBI-ProteinID:
XP_009702258
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagacgatgatgaaatcacccccgacctgtggcaagaagcctgctgg
attgttattagctcgtattttgatgaaaagggtttagtcaggcaacagttggattctttt
gatgagttcattcagatgtctgtgcagagaattgttgaagatgctccaccaattgattta
caagctgaagcccagcatgccacaggagaagtggaagagccgccccggtatctgttgaag
tttgaacaaatctatctttccaaacctacgcattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtggat
ataactaaaacagttattaaagaaggagaggatcagttacagacgcagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacatactgtttgttgaatggcttaact
gaccgtgatctttgtgaactgaatgagtgcccgcttgatcctggtggctactttatcatt
aatggatcagaaaaggttctgattgctcaagagaaaatggcaacaaacacagtgtatgtg
tttgcaaagaaggattcaaaatatgcctacacgggagagtgtagatcttgtctggaaaat
tcctctcgaccaacaagtactatatgggttagcatgctggccagaggtgggcagggtgcg
aagaagagcgctattggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcatcattgtctttcgtgcactaggctttgtgtccgacagggacattttagagcac
atcatatatgattttgaagatccagaaatgatggaaatggtcaaaccgtctctggatgaa
gcgttcgtcattcaggagcaaaatgttgctctaaatttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtatgctaaagaagtcttgcagaaagaaatg
ctcccacatgttggtgtcagtgacttctgtgaaaccaaaaaagcctattttctagggtat
atggttcatagattgttgctggcagcactgggaagaagagagcttgatgacagagatcat
tatggcaacaaaagactggatcttgctgggccgctgttagctttcctgttcagaggaatg
tttaagaatttgctgaaggaagtgagaatatatgcacagaagtttattgacagagggaaa
gatttcaacttggaactggcaattaaaaccagaattatttcagatggtttaaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccgcctgacttttgcatctacgctttcccatctgagacgcctgaattct
ccaattggtagagatggtaaactggcaaagcccagacagctgcacaacacgctgtgggga
atggtttgccctgctgagaccccagagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtgggatctcagccatccccaattctggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcggcaatagctgatgctaccaagatt
tttgttaacggctgctgggtaggaatacacaaagatccagagcagctcatgaatacccta
aggaagctccgtcgtcagatggacatcattgtgtcggaggtctcaatgattagagatatt
cgtgagcgagaaatccgcatctatactgatgcaggcagaatttgccgaccccttttaatt
gtggaaaaacagaagttgctgttgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaattacagttggcaggatctcgtggccagtggtgtagtagagtacattgataca
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtg
gcgtattgctcaacatacacgcactgtgagattcacccttccatgatcctgggagtatgt
gcatctatcatccctttccctgatcacaaccagtctcccaggaacacgtaccagtctgct
atgggtaaacaggctatgggagtttacattacaaactttcatgttcgcatggatacgctg
gcacatgtgttgtattatcctcagaagccccttgtaacaacacgctccatggagtacttg
cgatttagagagttaccagcaggtatcaactcgattgtagccattgcatcatacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcgtacaaagagcaagagtctaaaaaagggtatgaccaagaggaa
gtttttgaaaagcctacacgtgaaacgtgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggatgatgtcatcatt
ggcaaaacagtaacgctgccagaaaacgaagacgaactggaaagcactaacagacgtttc
accaagagagactgtagcacttttctgcgaaccagtgagactggtattgtagatcaggtg
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtacgctctgtaaga
atcccacaaattggagataaatttgccagcagacatggtcagaaaggaacctgtggtatc
cagtacaggcaagaggatatgcccttcacctgtgaaggcatcacacctgatataattatc
aacccccatgccatcccttcccgcatgaccattggtcacttgattgagtgtcttcagggg
aaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtcaat
gtgcagaagatttccaatcttttatcagattatggctatcatctaagaggaaatgaggtc
ctctacaatggctttactggtcgaaaaatcacatcacagatcttcattggtcctacgtat
tatcagcggttgaagcacatggtagatgacaaaatccattctcgtgcaagagggccaatc
cagatacttaacagacagcccatggaaggtagatctcgtgatggtggccttcgttttgga
gaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagaaagattg
tttgaagcttcagacccgtaccaagtccatgtctgtaacctctgtggaatcatggcgatt
gcaaacacaaggactcacacttatgaatgccggggatgccgtaataaaactcagatatct
ttggttcgaatgccctatgcctgcaaactcctcttccaagaactgatgtctatgagtatt
gcacctcgtatgatgagtgtttag
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integrated database retrieval system
