Cariama cristata (Red-legged seriema): 104165151
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Entry
104165151 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccri04121
]
104165151
Enzymes [BR:
ccri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104165151
Ubiquitin system [BR:
ccri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104165151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104165151
NCBI-ProteinID:
XP_009703014
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
VNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTPPHDSQLVDVGTQTDITFEH
IMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEVDLHR
VNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEA
VALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASMLQ
QKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTLGSQK
KLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPIDECERFRELLELKCQVKSANPYSL
YYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLNIVRTHKMQQLKDQYREPWMLHNS
GFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRTAE
GINCQGNEGAVAYNVSQKNSFASSDSHESSSGKCHASAKDPDLGKQLESKERKASDGSKS
PTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKD
FNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMKM
GRYWSKEERKXKEQRRRREFMMQSRLDCLKEQQGAEDKKEMNIIELSHKKMMKKRNKKIF
DNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtcaatgggaaggatttatcgaaggcaacacacgagcaggcagtggaagccttcaagacg
gccaaggagcccattgtggtgcaggtgctaagaagaactccacgcaccaaggtcttcact
cctccccacgactctcagctggtcgatgtgggcacacagacagatatcacttttgaacac
atcatggctctaagcaagatgggctcacctactccacccgtctccgtgctagacccatac
ctgctgcctgaagaccatccatcagtgcatgaatactatgacccaaatgactacatggga
ggaattcatcaagaaatggaccgtgatgagctggaattagaggaggtagatttacataga
gtgaacagccaggacaagcttggccttactgtatgttacagaacggatgatgaagatgac
atgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaagacggtcggctc
cgagaaggggatcgcattattcagatcaatggcatagaggtacagaaccgagaagaagct
gtggcacttctcagcagtgaagagagcaagaatatctccttacttgttgcaagaccagaa
attcagctggatgaaggatggatggatgatgatagaaatgattttctggatgacttgcac
atggacatgttagaggaacagcaccaccaggcaatgcaatttactgccagcatgcttcag
cagaagaagcatgaggaggatggaggtaccacagatacagccactattttgtctaaccag
cacgagaaggacagtggcgtggggcgcacagatgacagcactcgcaacgacgagagctcc
gagcaggaaaacaacgcggatgatcacaccacctcctccaacactttagggagccagaag
aagctgacgtacagtcacgacaccctaggaagtggcgatatgcagttcagcaacgagtcg
tttatctcggccgactgcacagacgtcgacttccttggcatccccatagatgaatgcgag
cgattccgggaactgctggaactgaagtgccaggtgaagtcagccaacccttacagtctg
tattatcataacagtactctggatatgagcaaaagcgaccaagaaagtgttgacagagag
ctggagatgctgaatgaggagctgcgcaatatcgagctagagtgtctgaatattgtgaga
actcataaaatgcaacagctgaaagatcagtaccgggagccctggatgctacataacagc
gggttccgcaactataacacaagcatcgatgttcgcaggcacgagctctcggacattacg
gagctccccgagaagtctgacaaggatagctcgagtgcatataacacaggcgaaagctgc
cgaagcacaccgctcacgctggagatttcccctgacaattcgctgcgcagaactgcagaa
ggcattaactgtcaaggtaatgagggggcagtggcatataatgtctcccaaaagaattca
tttgctagctcagacagtcatgaatccagcagtggtaaatgccatgcctctgctaaagat
cctgaccttggcaagcagctggaaagcaaggagagaaaagccagtgatggaagcaaaagc
cctactcatggccaaaaaccttctggctcctatgtctccccgtaccatcactctccgtat
aagcacgctcatattcctgcccacgcacagcactatcagagctacatgcagctgatccaa
cagaaatcagccgtggagtatgcacagagccaaatgagtctggtgagtatgtgcaaagac
tttaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtcagaagcgatggg
acccgctacattacaaagaggccagtcagggacaggctgctgagagaacgtgccataaag
attaaggaggagcgcagtggtatgactaccgatgacgatgccataagtgaaatgaagatg
ggccgttactggagcaaggaagagagaaagncaaaggagcagaggaggcggcgtgagttt
atgatgcagagcaggttagattgcttaaaggaacagcaaggtgcggaagacaagaaagag
atgaatatcattgaactgagccacaaaaaaatgatgaagaagagaaataaaaaaatattt
gacaattggatgacaatccaagaactgctaacccatggaacaaagtcaccagacggcaca
cgggtgtacaattccttcctgtcagtgactactgtataa
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