Cariama cristata (Red-legged seriema): 104165164
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Entry
104165164 CDS
T08341
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104165164 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccri03019
]
104165164 (CNOT10)
Messenger RNA biogenesis [BR:
ccri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104165164 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_MalT
TPR_17
DUF6058
TPR_7
BLOC1_2
EMP24_GP25L
DUF948
Motif
Other DBs
NCBI-GeneID:
104165164
NCBI-ProteinID:
XP_009703032
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MDFAVELTDQATEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDD
YKITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMIS
QGNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREI
KSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNL
GCIHFAMGKHNLGIFYFKKALQENDNACAQLGMGSSDPGKKFSGRPMCTLLTNKRYELLY
NCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKG
IVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEP
KQENGSKTSNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACS
AYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENV
TDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEY
DKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTHLALQIIKRNQLLPSVKTLSDMR
KKPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggattttgcagtggagctcacagatcaagctactgagaaacatgaaggagcaggtact
tctgggattactgatcaagaaaaggaattgtcgagcagtgcgttacaagcttttctggct
ggaaactacgatgcttgcttacaacacctaaatacccttcaagacataaacaaagatgac
tacaaaataactttgaatactgctgttgcagagttctgtaaaagtaaccagactacaaca
gacaatttgagacaaacccttaaccagctgaagaaccaggttcactctgttgttgaagaa
atggacggtttagatgatgttgagaacagtatgctgtactacaatcaagctgttattttg
tatcatctgcgtcagtatactgaagctatatcagttggggagaagctgtaccagtttata
gagcctttcgaagagaagtttgcccaggctgtgtgcttcttgcttgtagatttgtatctg
ctaacttaccaagctgagaaagccttgcatctgctggctgttctggaaaaaatgatttca
cagggcaacaataacagcaagaatggaaaaaatgagtcaggtaataatacaaataaagat
tcctcgaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacat
cagtataaggtgagagcgtatatccagatgaagtcactaaaagcatgcaaaagggagatc
aagtctgttatgaatacagctgggaattcagctccttctctctttctcaagagcaacttt
gaatatttgaggggcaattatcgtaaagcggtcaaacttttaaacagtgcaaacattgct
gaacatccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaataatctt
ggctgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaagcc
ttgcaagaaaacgataatgcgtgtgcccagctaggaatgggcagctcagatccaggtaaa
aaattttcagggagacctatgtgtacgctactgactaacaaacggtatgagctgctctac
aattgtggaattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgatt
gaggcagtccaggtttatcactcaaaccctcgtctttggctgagaatagcagaatgctgc
attgctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaaggga
attgtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtca
atacagaatgtcgtttataatgatgggcagtcctcagcaatacctgtagccagtatggaa
tttgcagcaatttgtctaagaaatgccttgctgctactaccagaagatcagcaggagcca
aagcaggaaaatggatctaaaactagtaatcaactggggggaaatacagaaaacagtgaa
agcagcgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctccacct
tcttcgcctttgaagaaacaggaattagaaaatttaaggtgctcaatacttgcgtgtagc
gcttacgtggctctggctttgggtgataaccttatggcgttgaatcacgcagataaactt
cttcagcaaccaaagctgtcggggtctcttaagtttctcgggcatttgtacgcagcagaa
gctctcatctctctagacagaatatctgatgccatcactcacttgaaccccgagaacgtc
actgatgtttccctcgggatctcttcaaatgagcaggatcaagggtctgacaaaggagag
aatgaggcaatggaatcttctggcaagcagaccccccagtgttaccccagttcggtcaca
tctgcgcgaacaatgatgttgtttaaccttggaagtgcttactgtttgaggagcgaatac
gacaaagctcgaaagtgtcttcatcaggctgcttcgctgatccaccccaaagagatccct
ccagaggctattctgctggctgtgtatcttgaattacagaacggtaacacacacctagca
ctgcagatcatcaagagaaaccagcttctcccttctgtgaaaacactctccgacatgcgg
aagaagcccgttttccagccagtccactcgatccagcccattcagatgccagctttcacc
acggttcaaaggaagtga
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