Cariama cristata (Red-legged seriema): 104165284
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Entry
104165284 CDS
T08341
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104165284 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccri03041
]
104165284 (DDX46)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104165284 (DDX46)
Spliceosome [BR:
ccri03041
]
Complex A
U2 snRNP components
U2 related factors
104165284 (DDX46)
Complex B
104165284 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104165284
NCBI-ProteinID:
XP_009703164
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
HYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRSRSRDRK
RQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTETRSRSKEKTEGV
EVSKEKKKDKEDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGI
TVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVI
EEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDS
IINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPT
PSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVS
AKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSK
EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE
LIRLQNSYQPTNKGRYKVL
NT seq
3121 nt
NT seq
+upstream
nt +downstream
nt
gcattatcggaagcgctctgcgtcgcgtggacgctctggtagccgttctagaagtcgttc
tccgtctgacaaaagaggaaaacgtggagaagacagacgctctagaagtagagatcgaga
acgtagacgtgagaggtcacgcagcagggacaagagaaggtctcgctcgcgtgacagaaa
gcgtcaaagacgttcaagaagtagagaaagggaacggagccgagagagaagaagatcccg
aagccgagagaggaggcgctccagaagcagaagtcgaggtagacggtctcgatcctccag
tccaagcaagaacaggaaaacagaaaccagatcaagatctaaagaaaagacagaaggtgt
ggaagtttccaaagaaaagaaaaaagacaaagaagacaaagaagaagagaaggataaaga
tgctaccacaaatactgtggccacagagaattttgatcagaacaaactagaagaagaaat
gagaaaacggaaagaaagagtggagaagtggagggaagagcaacgcaagaaagctatgga
aaacataggagaactgaaaaaagaaattgaagagatgaaacaggggaaaaaatggagttt
agaagatgatgacgatgatgaagaggaaaccgcagaaggagaaaaagaaggcaatgaggt
tgaagatgaagaattagatcctttggatgcttatatggaagaagtaaaagaagaggtcaa
gaagttcaatatgaggagtgtgaaaggtggaggtgggagtgagaagaaatctggaccaac
tgttaccaaggtagtaaccgtggtgacaaccaaaaaggcagctgcagagtcagaaaagaa
gaaaggggagctcatggagaatgaccaagatgcaatggagtattcctcagaagaggagga
agttgatcttcagactgccctgactggctatcagaccaagcagagaaagctgctagaacc
agtggatcatggaaagatagagtatgaacctttcaggaaaaacttctatgttgaagtacc
agaactagctaaaatgactcaagaagaggtgaatgtgtacaggctggagttggagggaat
tacagtcaagggaaaaggctgccccaaaccaataaaaacctgggtacagtgtggtatttc
catgaagattctcactgccctcaaaaaacacggctatgaaaagcccactcccattcaaac
ccaagctatcccagcaattatgaatggacgtgatttgattggtatcgctaaaacaggaag
tggaaaaactattgcatttctgttgcccatgttcagacacattatggatcagagagcgtt
agaagaaggagaaggtcccatagctgtcattatgacacctactcgtgagttggctttgca
gattaccaaggagtgtaagaaattctcaaagacacttgggcttcgagttgtctgtgttta
tggaggaacagggatcagtgaacagatagctgaactcaaaagaggtgctgaaattattgt
ttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgagtgacaaatct
ccgtagagtcacgtatgttgtacttgatgaagcagacagaatgtttgacatgggttttga
gcctcaggttatgcgcattgtagacaacgtcaggcctgatcgtcagactgtcatgttctc
tgctacttttcccagagctatggaggcactagctcggagaatcctaagtaaacctataga
agtgcaggtcggaggcagaagtgttgtctgttctgatgtggagcagcatgttattgtcat
agaagaagagaacaagtttttgaagttactggagctactgggacactatcaggagaaagg
atcggttatcatatttgtagataaacaagaacatgctgatgggttgttgaaagatttaat
gagagcctcttatccttgcttgtctcttcacggaggtatcgatcagtatgacagggacag
cataattaatgatttcaagaatggaatttgtaaacttctagtagccacatctgtagcagc
aaggggcttagatgtaaaacaattgatgctggtggtcaattacagctgtcccaaccatta
tgaagattatgtgcaccgagcaggccgaactggacgagctggcaataaagggtatgcata
tacattcattactgaggatcaggcacggtatgctggtgatatcattaaggctttggaatt
gtccgggaatccaattcctactgatttggagaagctctgggctgacttcaaagaccaaca
gaaggctgagggaaagttgattaaaaaaagcagtggattctctggcaaaggttttaagtt
tgatgaaacagaacaggctttggctaatgaaagaaagaagctccaaaaagcagctcttgg
cttgcaagattcagatgatgaagatacagcagttgatatcgatgaacaaattgaaagcat
gttcaattcaaagaaaagagtaaaagacatggcagcaccaggaacatcaaacgctcctac
accatcagctgggaatgcagaaaaattggaaattgctaaaagattggctttgagaattaa
cgcccagaagaatcttggagcagaggcacaagtattggtccccttccacttcaaggatgt
gatgcagcaggctacaaatgctatcctgagaggaggcacgattcaagcgcctactgtatc
tgccaagaccattgcagagcaactggctgaaaaaatcaatgctaagctcaattatgtacc
catagagaagcaggaggaagagaaacaggatggaggacaaaatgaatcctttaagagata
cgaagaagaattagagatcaatgacttcccacagactgccagatggaaagttacctccaa
agaagcgctacagagaatcagtgaatattctgaagctgctattacaatcagaggaactta
tttccctcccggcaaagaacccaaggaaggagaacgaaagatttatttggctatagaaag
tgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgacttataaaagagga
gctcatcagattgcaaaattcttaccaaccaaccaacaaaggaagatacaaagttctatg
a
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